Transcript Information: R_Transcript_178739.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39369131470962
Replicate 20.53519981453309
Replicate 30.49406688932878
Condition 2: 8 Hour
Replicate 10.43210349906903
Replicate 20.30691406448686
Replicate 30.42709672047969
Condition 3: 24 Hour
Replicate 10.58519900776501
Replicate 20.56219287368138
Replicate 30.12875120404057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178739.p1 GENE.R_Transcript_178739~~R_Transcript_178739.p1 ORF type:complete len:510 (+),score=63.01,zf-RVT|PF13966.2|4.4e+03,zf-RVT|PF13966.2|8.8e-19,RVT_1|PF00078.23|2.5e-18 R_Transcript_178739:3280-4809(+)
ATGAATTGCATATCTTCATCAATATTTTCTGTAAGCATAAATGTTAGTCCCAATGGATATTTTGAAGGGAAATATGTAGTGAGACAAGGAGATCCCATATCTCCCTATATTTTTGTCTTGTGCATGGAAGGTCTTTCTAGAATGTTGAGGAATATGTCTATTGCCAGGGGATTCTATTATAATCCAAAGATAGTTCAAGTAAAACTTAATCACCTCATTTTTGCAGATGATTTGCTTATCTTTAGTAGAGGTGATATTTCCATTATTACTGTTGTTGTAGAATGTCTGAAAAGTTTCTCTTGTATGTTCGGGTTACATGTCAATACCTCTAAGACTGAGATGTTTATGGGAGGAATCTCAATTGATATACAACAAAAGATCCTTGAAAAGACTGGTTTTGTCCAAGGCTCTCTCCCTGTTAGGTACTTGGGACTGCCATTGAGCTCAATGGGAATTCACCATGATATATGTAATGGATTGCTGGAAAAAGTTAAGAAGAAACTAAATCATTGGAGTATGCAGACACTTTCTTATGCTGGTAGAGTGGAGCTATTGAATTCAGTATTGTTTGGGATTGGAAATTTCTGGTGTGCTACATTCTTGTTGCCTAAGAAGACACTCCTTGTTATTGAGAGTTTATGCAGAAAATCTCTGGGGCATCAAAGAATCAGAGATGAGGATGGTGTTTATCTCCTGGAAGACACTTTGTCGGGAGAAAAGTTTGGTGGATTGCAGATAAAGGAGGTCCTAAGTTGGAATAAATCACTTGTTGTCAAGTGGATTTCTAAGCTGCAGGGACATAGAGGATCACTATGGAAGTATTGGTGCCATAATTACTATTTGAAAACTAAGAGTATATGGGAAGTTCAACCTAGACAAGGTGACTCTTGGGCTTGGAAGAAACTACTTCATCTCAAAGATGAATTCATTAATCTAGTTGGAGCACATCCAGCACCCGAACTGATTTTTCAATGGGACGCTAATAAGAAGATTACCAAAGAGGCCTATTATGTCTTCAAAGGTACTAGTCAGAAGAAGAGATGGGCTAGAACAATATGGGACAGTGCTATTATGCCAAAGCATTCTATTATGGCTATAATGGCCATTTCAAATGGGCTTCCTACACAGGACAATTATGCAAGGAGGGGATTGCCAATAGTAAGTAGATGTAGCCTTTGCTGTAATAGTCAAGAGACTACTAGCCACCTTTTCTTTGTCTGTGACTATGCAACAGAGGCCTGGAAGGGTATTCTATGCTGGATTAGTATTCAAAGAAAGGGATTGAGTCTCAAAGGAGAACTTAAATGGTTCAGCAAATACATCAGAGGCAAGAGTAGGGAAAAGAAGATGAAGAGATGTGCCCTGGCCACAACTATATATGAACTTTGGCGTGAAAGAAATCGTAGGATCTTCAAAATCCAAGAGCAATCAGTAAGTAGGCTCATCCAACAGATTAAATTCTTTGTTTCAACTAGAATGCTGTATGTAGAAGGGACTACCTATGAGAACAAGACTAATCTACTATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178739.p1 GENE.R_Transcript_178739~~R_Transcript_178739.p1 ORF type:complete len:510 (+),score=63.01,zf-RVT|PF13966.2|4.4e+03,zf-RVT|PF13966.2|8.8e-19,RVT_1|PF00078.23|2.5e-18 R_Transcript_178739:3280-4809(+)
MNCISSSIFSVSINVSPNGYFEGKYVVRQGDPISPYIFVLCMEGLSRMLRNMSIARGFYYNPKIVQVKLNHLIFADDLLIFSRGDISIITVVVECLKSFSCMFGLHVNTSKTEMFMGGISIDIQQKILEKTGFVQGSLPVRYLGLPLSSMGIHHDICNGLLEKVKKKLNHWSMQTLSYAGRVELLNSVLFGIGNFWCATFLLPKKTLLVIESLCRKSLGHQRIRDEDGVYLLEDTLSGEKFGGLQIKEVLSWNKSLVVKWISKLQGHRGSLWKYWCHNYYLKTKSIWEVQPRQGDSWAWKKLLHLKDEFINLVGAHPAPELIFQWDANKKITKEAYYVFKGTSQKKRWARTIWDSAIMPKHSIMAIMAISNGLPTQDNYARRGLPIVSRCSLCCNSQETTSHLFFVCDYATEAWKGILCWISIQRKGLSLKGELKWFSKYIRGKSREKKMKRCALATTIYELWRERNRRIFKIQEQSVSRLIQQIKFFVSTRMLYVEGTTYENKTNLLL*

Click here to download the sequence:
Link to NCBI Protein BLAST