Transcript Information: R_Transcript_17874.p3


Annotated TAIR IDAT2G44200.1
Annotated Gene NameCBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18276302-18278240 | Forward length=493
E-Value7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4897492812645
Replicate 217.903822060409
Replicate 314.383300351072
Condition 2: 8 Hour
Replicate 114.425780899152
Replicate 216.640656253906
Replicate 39.7090010295093
Condition 3: 24 Hour
Replicate 19.6102448860157
Replicate 28.0356369601328
Replicate 313.913114607175


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17874.p3 GENE.R_Transcript_17874~~R_Transcript_17874.p3 ORF type:complete len:129 (+),score=21.69,Cir_N|PF10197.5|3.2e-16,Cir_N|PF10197.5|7.9e+03 R_Transcript_17874:136-522(+)
ATGGCGTTGAAGTTCTTAAACAAGAAAGGATGGCATACAGGAAGTCTTCGAAACATAGAAAACGTATGGAAAGCAGAGCAAAAGCACGACGCAGAGCAACGCAAATTAGAGGAGCTTCGTAAGCAGATTCAAGAGGAGAGAGAACGCGATGAGTTTCGTGAACTCCAACAGAAAGCCGGCCTTACTCCGAGGCAGGAAAGATTGGAATTTCTTTATGATTCTGGGCTGGCTGTTGGGAAATCAAGTTCTGATGGATTTAAGGCGCTTGAAGCTTATCCTCGTCCCGATAACTCGGCACCGGCTTCCGGTTCAGGTTCGGTACCGGCACCGGATTCTTCGAAGGTGAGTTTCAACTTCACATTTACTGATTTGCAATCAATTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17874.p3 GENE.R_Transcript_17874~~R_Transcript_17874.p3 ORF type:complete len:129 (+),score=21.69,Cir_N|PF10197.5|3.2e-16,Cir_N|PF10197.5|7.9e+03 R_Transcript_17874:136-522(+)
MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQRKLEELRKQIQEERERDEFRELQQKAGLTPRQERLEFLYDSGLAVGKSSSDGFKALEAYPRPDNSAPASGSGSVPAPDSSKVSFNFTFTDLQSIA*

Click here to download the sequence:
Link to NCBI Protein BLAST