Transcript Information: R_Transcript_178785.p1


Annotated TAIR IDAT2G38080.1
Annotated Gene NameLaccase/Diphenol oxidase family protein
Annotated Gene Symbol(s)IRX12, LAC4, ATLMCO4, LMCO4
Annotation TypeOrtholog
Chromosome Positionchr2:15934540-15937352 | Forward length=558
E-Value4.3E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6530020103051
Replicate 20.32191942716641
Replicate 30.5073042397785
Condition 2: 8 Hour
Replicate 11.0428392226254
Replicate 21.1808983595856
Replicate 31.3915204053108
Condition 3: 24 Hour
Replicate 13.598157180492
Replicate 22.1040792127297
Replicate 32.3491062951866


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178785.p1 GENE.R_Transcript_178785~~R_Transcript_178785.p1 ORF type:complete len:587 (+),score=48.72,Cu-oxidase|PF00394.18|1.1e-43,Cu-oxidase|PF00394.18|55,Cu-oxidase_2|PF07731.10|19,Cu-oxidase_2|PF07731.10|4.8,Cu-oxidase_2|PF07731.10|4e-40,Cu-oxidase_3|PF07732.11|9e-41,Cu-oxidase_3|PF07732.11|6.4e+02,Cu-oxidase_3|PF07732.11|1.4e+03 R_Transcript_178785:92-1762(+)
ATGAAGCCTTGGCTTTGGGCACTGGTTGTCTTTCTTTTGTTTCCAGCATTAGCTGAAGCCATGGTTAGACATTACAAGTTCCAGGTTGTAATGAAGAATTTTACAAAGCTCTGCTCTACCAAGCCAATTGTGACAGTCAATGGCAAATTTCCGGGGCCAACCCTGCGTGCAAGGGAGGACGATACCGTTCTTGTAAATGTGATCAATCATGTGAACTACAATGTCACAATACACTGGCATGGAATTCGACAACTTCGTACAGGCTGGTCAGATGGTCCAGCATACATAACACAATGCCCAATACAACCACGGCAAGGCTATCTTTATAACTTTACTATTACAGGTCAAAGAGGCACCCTCCTTTGGCATGCACATATTTCATGGCTACGGGCCACCGTACATGGGGCCATTGTCATCTTGCCAAAGAAGGGTGTCCCGTACCCATTTCCTAAGCCTGCCAAGGAAAAATTAATTGTCTTAGGCGAATGGTGGAAAGCAGACACTGAAGCTGTGATTAATCAAGCTATGCAATCCGGCATGACACCAAATGTGTCAGATTCACATACCATCAACGGTCATACTGGACCAGTTCGGAATTGTTCTATATCTCCCCAGGGAACTTACACATTACACGTTGAACACAATAAGAGATACTTACTCCGTATAATCAACGCTGCAGTCAATGACGAGTTCTTCATCAAAATAGCAGGACATTTGTTCACAGTCGTCGAAGTTGATGCAAGCTACACCAAACCATTCACAACGGACACAATTTACATAGCCCCAGGACAAACCACAAATGTCCTTTTAACAGCTAATCAAGAACCAGCCAAATACTTGATTGGCTTATCTTCCTTCATGGATGTACCAACAGTTGCTGTTGACAACATAACAAACTATGGCTTCTTACGTTATAAAGGCCAAAAAATTGGATCTCCCTTAGCCATTACAGCCATGCCACCACTAAACGCTACAGCTTCCCAATTAAATTTCACTCATTCTCTTCGAAGCCTAAATTCGGACCAATATCCATCCAAAGTGCCATTAACCATTGATCATTCCCTGATTTTCACCATGAGTGTTGGGGTTAACCCTTGTTCAACTTGTCTTAATGGTAGTAGGCTTGTAGGAGATTTTAACAATGTCACTTTTATAATGCCTACTATTGCACTTCTCAAAGCTCATTATCATAACATAAGTGGAGTTTTTACTGACGATTTTCCTGCAAAACCTCCAATGAGTTACAACTTTACTGGGAATTATACTGGGGGTTTGGTCACCTTGAATGGGACTAAAGTTTATAGGTTACCTTTTAATGCTACGGTCCAACTTGTGCTTCAAGGTACTACTCTCATTGCACCTGAAAGCCATCCGACCCATTTGCATGGATCCAATTTCTTTGTGGTTGGTACGGGCCGAGGGAATTATGATCCAAGTAAGGATCCAGATAATTTCAATCTTGTTGATCCTGTTGAGAGAAACACTATTGATGTGCCTACCAGTGGATGGACTGCCATCAGATTCCGGGCAGATAATCCAGGTATATGGTTCTTGCATTGCCATCTAGAAATACATACATCATGGGGACTAAAGATGGCATTCTTAGTAGAAAACGGCAAAGGCCCTAATGAGTCTCTCTTACCACCTCCAAAGGACTACCCCAAATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178785.p1 GENE.R_Transcript_178785~~R_Transcript_178785.p1 ORF type:complete len:587 (+),score=48.72,Cu-oxidase|PF00394.18|1.1e-43,Cu-oxidase|PF00394.18|55,Cu-oxidase_2|PF07731.10|19,Cu-oxidase_2|PF07731.10|4.8,Cu-oxidase_2|PF07731.10|4e-40,Cu-oxidase_3|PF07732.11|9e-41,Cu-oxidase_3|PF07732.11|6.4e+02,Cu-oxidase_3|PF07732.11|1.4e+03 R_Transcript_178785:92-1762(+)
MKPWLWALVVFLLFPALAEAMVRHYKFQVVMKNFTKLCSTKPIVTVNGKFPGPTLRAREDDTVLVNVINHVNYNVTIHWHGIRQLRTGWSDGPAYITQCPIQPRQGYLYNFTITGQRGTLLWHAHISWLRATVHGAIVILPKKGVPYPFPKPAKEKLIVLGEWWKADTEAVINQAMQSGMTPNVSDSHTINGHTGPVRNCSISPQGTYTLHVEHNKRYLLRIINAAVNDEFFIKIAGHLFTVVEVDASYTKPFTTDTIYIAPGQTTNVLLTANQEPAKYLIGLSSFMDVPTVAVDNITNYGFLRYKGQKIGSPLAITAMPPLNATASQLNFTHSLRSLNSDQYPSKVPLTIDHSLIFTMSVGVNPCSTCLNGSRLVGDFNNVTFIMPTIALLKAHYHNISGVFTDDFPAKPPMSYNFTGNYTGGLVTLNGTKVYRLPFNATVQLVLQGTTLIAPESHPTHLHGSNFFVVGTGRGNYDPSKDPDNFNLVDPVERNTIDVPTSGWTAIRFRADNPGIWFLHCHLEIHTSWGLKMAFLVENGKGPNESLLPPPKDYPKC*

Click here to download the sequence:
Link to NCBI Protein BLAST