Transcript Information: R_Transcript_178842.p1


Annotated TAIR IDAT1G17020.1
Annotated Gene Namesenescence-related gene 1
Annotated Gene Symbol(s)SRG1, ATSRG1
Annotation TypeHomolog
Chromosome Positionchr1:5820258-5821741 | Forward length=358
E-Value8E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5286693552104
Replicate 26.7910882652121
Replicate 36.1854988761124
Condition 2: 8 Hour
Replicate 17.0478602370409
Replicate 27.0997458664892
Replicate 37.5945907936931
Condition 3: 24 Hour
Replicate 15.7224207926621
Replicate 25.1702238942303
Replicate 36.1051757880366


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178842.p1 GENE.R_Transcript_178842~~R_Transcript_178842.p1 ORF type:5prime_partial len:337 (+),score=61.50,2OG-FeII_Oxy|PF03171.16|9e+02,2OG-FeII_Oxy|PF03171.16|2.7e-27,DIOX_N|PF14226.2|2.9e-26 R_Transcript_178842:1-1011(+)
AAAAGTGTGCCAGAGAGATATGTTCAGCCTAACAAAGATCATCCACTACTACCAGCTTATGATGATGATCTTCAAGTTCCCATCATTGACATGGATGGCTTGATCTCAGGAGATCAAATTGAGTTGCAGAGATTTCACTCAGCATGTCAAGACTGGGGATTTTTCCAGTTGATAAACCATGGAGTAAGCCCTTCATTGATAGAGAAGTTCAAGTTGGAGACACAACAATTCTTCGAACTTCCAATGGAAGAAAAGAGAAAGTTTTGGCAAACACCAACAGATGTGGAGGGATTTGGGCAAGCATTTGTTGTATCTGATGACCAGAAGCTCGATTGGGCAGATATTTTTTTCTTGACTACCCGACCCGAACATCGTCGTCGCCCCAACTTGTTTCCTAAACTACCTACCCCCTTCAGAGATACAATGGAAATCTACTCAGCTGAGTTGGAAGCACTTGCAGTGAAAATCCTAGAGTGCATGGCAAAAGCTCTAGAGATTGAGGTGGAAGCCATGAAAGGGGTGTTTGGGGAAGGACTTCAATCGATGAGAATGAACTATTATCCATCATGTCCTCAACCGGAAAAGGTCATTGGTCTAACTCCTCATTCTGATGCTGTTGGACTCACAATTCTTCTTCAGCTTAATGAAATGGAAGGCCTCCAAATCTTATATAATGGTCAATGGGTTCCTGTCAAGCCCCTTCCCAATGCTTTTGTTGTCAACATTGGAGATATCTTGGAGATTATTACTAATGGCATATATCGAAGTGTTTTGCACCGAGCAGTAGTGAATGCAAGTAAGGAGAGGTTATCAGTTGCCACATTTTATAACCCATCTCCAGATCGAGAAATAGGCCCTATCCCTCACTTAGTTACGACCAATACTCCAGCCAGGTTTAGAAATATCCGCATGGTTGATTTTTTTGAGGGATTATTTGCGCGTGCCCTTGACAGAAAATCCTACCTTGATTCCATGAGGATCACTAAAAATGATGAAGATACAACATCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178842.p1 GENE.R_Transcript_178842~~R_Transcript_178842.p1 ORF type:5prime_partial len:337 (+),score=61.50,2OG-FeII_Oxy|PF03171.16|9e+02,2OG-FeII_Oxy|PF03171.16|2.7e-27,DIOX_N|PF14226.2|2.9e-26 R_Transcript_178842:1-1011(+)
KSVPERYVQPNKDHPLLPAYDDDLQVPIIDMDGLISGDQIELQRFHSACQDWGFFQLINHGVSPSLIEKFKLETQQFFELPMEEKRKFWQTPTDVEGFGQAFVVSDDQKLDWADIFFLTTRPEHRRRPNLFPKLPTPFRDTMEIYSAELEALAVKILECMAKALEIEVEAMKGVFGEGLQSMRMNYYPSCPQPEKVIGLTPHSDAVGLTILLQLNEMEGLQILYNGQWVPVKPLPNAFVVNIGDILEIITNGIYRSVLHRAVVNASKERLSVATFYNPSPDREIGPIPHLVTTNTPARFRNIRMVDFFEGLFARALDRKSYLDSMRITKNDEDTTS*

Click here to download the sequence:
Link to NCBI Protein BLAST