Transcript Information: R_Transcript_17886.p1


Annotated TAIR IDAT3G20810.2
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)JMJD5
Annotation TypeOrtholog
Chromosome Positionchr3:7275814-7278144 | Forward length=429
E-Value4.2E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0175866734338
Replicate 20.58526272937416
Replicate 30.71832975040199
Condition 2: 8 Hour
Replicate 14.521779937993
Replicate 24.9863987381041
Replicate 39.5501505354649
Condition 3: 24 Hour
Replicate 12.3997707903523
Replicate 21.3064090632049
Replicate 32.5929684994931


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17886.p1 GENE.R_Transcript_17886~~R_Transcript_17886.p1 ORF type:complete len:287 (+),score=29.24,Cupin_8|PF13621.2|2.2e-09 R_Transcript_17886:89-949(+)
ATGGCGCACCCCAAGACCATTGATACGCCGATTCTAGAGAGAGAAACGCCGAGAATCCTCCAGCGGGTTTCTGAGGAGGGAGGCTACGCTTTCGCCAGCATGGCGGCGCGTGCGACGGCTCGTGAGGCGGCGGAGGCGGCTCGTGATATGGCGTGGGAGCAGCTCCACTCGGGGCCATGGAGCTCGGTGCTGCCAATCTGGAGAGACGCCTACTCAATGGCGTGCCTTCACGTGGCGAAACACCACTTCATGAATGGCGAGTTTGGAGACACTCTAAGAGCGCTAGACATGGGTTTGATTATGGGTGGCTCGTTGTTAAAGCCAGATTTGGAAGCCGCTGTTGAGAAAGTTATGGCGGTTAAGAACAACCAGGAGAGAGAAAATGGTGGCAACACGGTTTTGGAGAATAGTAATAATAATTCTGGTAATGGGATGTTGTTCAGCTCAGATGAGTTTAATGAAGCCGAGGTTTTCCGGTTATTGCCTTTCAAATCACTGTCCTCAAAGATTGTCACCAGGCGTTCAGGGTTGTCATTGGAGGGGTTCCTTCGTGAGTACTATCTATCGGGATCTCCGGTTATATTAAGTAGTTCAATGTCTCATTGGCCGGCTATAACCAAGTGGAATAACTTGGATTACTTGAGGAGAGTTGCTGGTGATCGTACTGTTCCAGTCGAGGTTGGAAGAAACTACTTGTGTTCTGAGTGGAAGCAAGATCTTGTCACGTTTTCACAGTTTCTTGAACGAATTCAGTCCGGTAACTCCTCTGAAGTTCCCACGTATCTTGCGCAACATCCGTTGTTTGACCAGGCATGTCCTTTACATGGAAGAGTTGTGTGCTTCACTTCATATAGGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17886.p1 GENE.R_Transcript_17886~~R_Transcript_17886.p1 ORF type:complete len:287 (+),score=29.24,Cupin_8|PF13621.2|2.2e-09 R_Transcript_17886:89-949(+)
MAHPKTIDTPILERETPRILQRVSEEGGYAFASMAARATAREAAEAARDMAWEQLHSGPWSSVLPIWRDAYSMACLHVAKHHFMNGEFGDTLRALDMGLIMGGSLLKPDLEAAVEKVMAVKNNQERENGGNTVLENSNNNSGNGMLFSSDEFNEAEVFRLLPFKSLSSKIVTRRSGLSLEGFLREYYLSGSPVILSSSMSHWPAITKWNNLDYLRRVAGDRTVPVEVGRNYLCSEWKQDLVTFSQFLERIQSGNSSEVPTYLAQHPLFDQACPLHGRVVCFTSYRH*

Click here to download the sequence:
Link to NCBI Protein BLAST