Transcript Information: R_Transcript_17888.p1


Annotated TAIR IDAT3G20810.2
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)JMJD5
Annotation TypeOrtholog
Chromosome Positionchr3:7275814-7278144 | Forward length=429
E-Value3.1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21306958312901
Replicate 20.24509300096846
Replicate 30.5347876481592
Condition 2: 8 Hour
Replicate 12.0007905209811
Replicate 22.0881757361418
Replicate 33.3195552496427
Condition 3: 24 Hour
Replicate 11.3399498381929
Replicate 20.6865450238312
Replicate 31.36265865755


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17888.p1 GENE.R_Transcript_17888~~R_Transcript_17888.p1 ORF type:3prime_partial len:257 (+),score=39.00,Cupin_8|PF13621.2|2.4e-11 R_Transcript_17888:92-859(+)
ATGGCGAACTCCAAGACCATTGATACGCCGATTCTAGAGAGAGAAACCCCGAGAATCCTCCAGCGGGTGTCTGAGGAAGGAGGCTACGCTTTCGCCAGCATGGCGGCGCGTGCGACGGCTCGTGAGGCGGCGGAGGCGGCTCGTGATATGGCGTGGGAGCAGCTCCACTCGGGGCCATGGAGCTCGGTGCTGCCAATCTGGAGAGACGCCTACTCAATGGCGTGCCTTCACGTGGCGAAACACCACTTCATGAATGGCGAGTTTGGAGACACTCTAAGAGCGCTAGACATGGGTTTGATTATGGGTGGCTCGTTGTTAAAGCCAGATTTGGAAGCCGCTGTTGAGAAAGTTATGGCGGTTAAGAACAACCAGGAGAGAGAAAATGGTGGCAACACGGTTTTGGAGAATAGTAATAATAATTCTGGTAATAGGATGTTGTTCAGCTCCGATGAGTTTAATGAAGCTGAGGTTGGAAGAAACTACTTGTGTTCTGAGTGGAAGCAAGATCTTGTCACGTTTTCACAGTTTCTTGAACGAATTCAGTCCGGTAACTCCTCTGAAGTTCCCACGTATCTTGCGCAACATCCGTTGTTTGACCAGATAAAAGAGCTTAGGAGGGACATTCTTATTCCAGACTATTGTTATGCTGGTGGTGGTGAACTTAGGTCCGTTAATGCTTGGTTTGGTCCTGCTGGGACTGTGACACCTTTACATCATGATCCGCACCACAATATCCTTGCACAGGCAAGTGACTTCTCTTCTACCAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17888.p1 GENE.R_Transcript_17888~~R_Transcript_17888.p1 ORF type:3prime_partial len:257 (+),score=39.00,Cupin_8|PF13621.2|2.4e-11 R_Transcript_17888:92-859(+)
MANSKTIDTPILERETPRILQRVSEEGGYAFASMAARATAREAAEAARDMAWEQLHSGPWSSVLPIWRDAYSMACLHVAKHHFMNGEFGDTLRALDMGLIMGGSLLKPDLEAAVEKVMAVKNNQERENGGNTVLENSNNNSGNRMLFSSDEFNEAEVGRNYLCSEWKQDLVTFSQFLERIQSGNSSEVPTYLAQHPLFDQIKELRRDILIPDYCYAGGGELRSVNAWFGPAGTVTPLHHDPHHNILAQASDFSSTR

Click here to download the sequence:
Link to NCBI Protein BLAST