Transcript Information: R_Transcript_17891.p1


Annotated TAIR IDAT3G20810.2
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)JMJD5
Annotation TypeOrtholog
Chromosome Positionchr3:7275814-7278144 | Forward length=429
E-Value2.9E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7219774485584
Replicate 20.99039152907066
Replicate 31.5127090865384
Condition 2: 8 Hour
Replicate 18.7779515848615
Replicate 29.070923765764
Replicate 36.1646979465465
Condition 3: 24 Hour
Replicate 10.86633234821525
Replicate 21.4564793606985
Replicate 30.61946334019521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17891.p1 GENE.R_Transcript_17891~~R_Transcript_17891.p1 ORF type:5prime_partial len:106 (+),score=18.13,Cupin_8|PF13621.2|2e-11 R_Transcript_17891:2-319(+)
GGAAGAAACTACTTGTGTTCTGAGTGGAAGCAAGATCTTGTCACGTTTTCACAGTTTCTTGAACGAATTCAGTCCGGTAACTCCTCTGAAGTTCCCACGTATCTTGCGCAACATCCGTTGTTTGACCAGATAAAAGAGCTTAGGAGGGACATTCTTATTCCAGACTATTGTTATGCTGGTGGTGGTGAACTTAGGTCCGTTAATGCTTGGTTTGGTCCTGCTGGGACTGTGACACCTTTACATCATGATCCGCACCACAATATCCTTGCACAGGCAAGTGACTTCTCTTCTACCAGGTTGTTGGTAAGAAGTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17891.p1 GENE.R_Transcript_17891~~R_Transcript_17891.p1 ORF type:5prime_partial len:106 (+),score=18.13,Cupin_8|PF13621.2|2e-11 R_Transcript_17891:2-319(+)
GRNYLCSEWKQDLVTFSQFLERIQSGNSSEVPTYLAQHPLFDQIKELRRDILIPDYCYAGGGELRSVNAWFGPAGTVTPLHHDPHHNILAQASDFSSTRLLVRSI*

Click here to download the sequence:
Link to NCBI Protein BLAST