Transcript Information: R_Transcript_17899.p1


Annotated TAIR IDAT3G20810.2
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)JMJD5
Annotation TypeOrtholog
Chromosome Positionchr3:7275814-7278144 | Forward length=429
E-Value8.5E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36999245178484
Replicate 20.70933447352358
Replicate 30.46432576208417
Condition 2: 8 Hour
Replicate 14.6324609359653
Replicate 24.6836982234916
Replicate 37.4814070800244
Condition 3: 24 Hour
Replicate 11.5512031910611
Replicate 21.9372862539021
Replicate 33.1056878271949


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17899.p1 GENE.R_Transcript_17899~~R_Transcript_17899.p1 ORF type:internal len:148 (-),score=18.77,Cupin_8|PF13621.2|1.3e-10 R_Transcript_17899:2-442(-)
GGGAATAGTAATAATAATTCTGGTAATAGGATGTTGTTCAGCTCCGATGAGTTTAATGAAGCTGAGGCTTTCCGGTTATTGCCTTTCAAATCACTGTCCACAAAGATTGTCACCAGGCGTTCAGGGTTGTCATTGGAGGGGTTCCTTCGTGAGTACTATCTATCGGGATCTCCGGTTATCTTAAGTAGTTCGATGTCTCATTGGCCGGCTCTAACCAGGTGGAACAACTTGGATTACTTGAGGAGAGTTGCTGGTGATCGTACTGTTCCAGTCGAGGTTGGAAGAAACTACTTGTGTTCTGAGTGGAAGCAAGATCTTGTCACGTTTTCGCAGTTTCTTGAAAGAATTCAGTCCGGTAACTCCTCTGAAGTTCCCACATATCTTGCGCAACATCCGTTGTTTGACCAGATAAAAGAGCTTAGGAGGGACATTCTTATACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17899.p1 GENE.R_Transcript_17899~~R_Transcript_17899.p1 ORF type:internal len:148 (-),score=18.77,Cupin_8|PF13621.2|1.3e-10 R_Transcript_17899:2-442(-)
GNSNNNSGNRMLFSSDEFNEAEAFRLLPFKSLSTKIVTRRSGLSLEGFLREYYLSGSPVILSSSMSHWPALTRWNNLDYLRRVAGDRTVPVEVGRNYLCSEWKQDLVTFSQFLERIQSGNSSEVPTYLAQHPLFDQIKELRRDILIP

Click here to download the sequence:
Link to NCBI Protein BLAST