Transcript Information: R_Transcript_17901.p1


Annotated TAIR IDAT1G36990.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:14027594-14029711 | Reverse length=581
E-Value3.3E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.42664145993
Replicate 211.988099748294
Replicate 317.039922257497
Condition 2: 8 Hour
Replicate 115.298672552683
Replicate 218.603670047316
Replicate 324.133054903125
Condition 3: 24 Hour
Replicate 121.984066627508
Replicate 219.140942462948
Replicate 321.780587045689


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17901.p1 GENE.R_Transcript_17901~~R_Transcript_17901.p1 ORF type:complete len:613 (+),score=164.44 R_Transcript_17901:1090-2928(+)
ATGGAAAGAAGTGAACCCAGTTTAGCTCCAGAATGGCTGAGAAGCAATGGAGGTGGCACTGGGGTGGGCAGTTCAAGCCACCATTTTGCATCATCACAACCAGATGTTCCTGTCTTGGCTCTACCAAAAAGAAATAGGTCTTCCAAGAGTAATGGTAGTTCTGATGTTCTGCATTCTTCTATCCTAGAGCGGAATTCTTCGTCCAATTCTAGGAGAAGTTCAAGCAGTAACGGTTCATGTAAGTATGACAAGAACTCCTATTCACGGTCCTATAGCAGTTTTAATCGAAGTCAACGCGATAGGGATAGAGAAAGGTTAAATGTTGCTGACAACTGGGATTTGGAGTATTCGGACCCCTTGAGGAGCATGATCACTGGAAGAAATGAGGACACTTTAAGGCGTTCTCAGTCCATGATTTCGAGGAAGCAGGGAGAGTTTCAGCAACGAAGGATGTCAACAGAATTGAGGAATGAAAGCCATAACAATCAGGACAATGGAAATGGCACTCATTTGGTGGGTAATAGTGCTCCTGGTGTCCCAAAGGTGTCATTTGAAAAGGATTTCCCAGTGCTTGGGTCTGATGAGAGGCCCAAAACTCCAGATATAATAAGAGTCTCGTCTCCTGGGTTGGGCAGGGGTGTTCAGAGCCTGTCCATTGCTAATTCACCATTACTTGGCGGTGAAAGTTGGACATCAGCTCTTGCTGAGGTGCCTACAGGAAGCAGTGGCAATGGGTCCTCACCTACGCTGCAACCTCCTGCAACTGCTTCTAATGCAGTTCCTGGGGCTGGAAGCACATCTCCTGCCCTCAATATGGCAGAAGCACTAGTGCAGGCACCGGCACGTTCTCAAAATGTTCCACAGCCATCTGTTCAAGTGCAAAGAGAAGAGTTGGCCATTGCACAATCCAAGAAATTGATTCCCATGACACCGGTGCTACCTAAAACTTTGGTTAATTCATCTGATAAGCTGAAGCCTAAGACATCAGGGAGAGCTAGTGATGGAATGGTTGCACCAAAGAATGGGATGCAGCAGCTAGCTCCATTGCAGCTTGGCAGTCAATCTGTTAGGGGCACAGGTGTTAGAGTGGATAGCCCAAAGTCACCATCGTCCGGAAGACTGCTAGTGCTTAAACCTGTTCGTGAGAAGGGTGTTTCCCCTGTTGTGAAGGATGTTCAAGGTCAAACAACTAATGTTAATAACAGAGTAGCTAGTGGTCTTTCTGCTACTGCTCATTCAGTTGCCTCTGTTCATTTGAAGAACTCAATCAACCCGAAGCTTTGTTCTGGTGAGCGTAAACCATCTGGTGTTAGTTTGAATCCTGGATCTGTGGTTGATAAGCGATACCAGAGCCGGAATGATTTCTTTAACCTAGTGAGAAAGAAGTCTATGAACACATCTGGAACTGCTGATTCGGGAACTGCTCTTTCATCTGATATGGTGGACAAGTCAGACAAAGAAGTGAAGGGAATGCCTAATGCTGAAGTCATACCTTCAGAAATGGGAACTGAGGTGAAACGCAACGGAGAAACATGTACAGAAGCTGTGAGTTTCTCCCATTTGACAGAGGACGACTATGCATTTATCTATCCAACTGAAGAAGAGAGAGAACTCTTACGTTCTCTTGGATGGGAGGAGGAGGATGCTGAAGATTTTGAAGCCATTACAGAGGAGGAGATAAGTGCTTTCTATCAGCGGGTCTTGACAGATCGTAGGGCAACTGCTAAACTGTGTCGAGGTTTATGGCCAAAGATACTGTCGCATTTTGAACTTCGTGCTGCATGTTCTGGTGCAGCTTCCACTGAACCAAGTGCTTCCCCCTCTCAGACTGAAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17901.p1 GENE.R_Transcript_17901~~R_Transcript_17901.p1 ORF type:complete len:613 (+),score=164.44 R_Transcript_17901:1090-2928(+)
MERSEPSLAPEWLRSNGGGTGVGSSSHHFASSQPDVPVLALPKRNRSSKSNGSSDVLHSSILERNSSSNSRRSSSSNGSCKYDKNSYSRSYSSFNRSQRDRDRERLNVADNWDLEYSDPLRSMITGRNEDTLRRSQSMISRKQGEFQQRRMSTELRNESHNNQDNGNGTHLVGNSAPGVPKVSFEKDFPVLGSDERPKTPDIIRVSSPGLGRGVQSLSIANSPLLGGESWTSALAEVPTGSSGNGSSPTLQPPATASNAVPGAGSTSPALNMAEALVQAPARSQNVPQPSVQVQREELAIAQSKKLIPMTPVLPKTLVNSSDKLKPKTSGRASDGMVAPKNGMQQLAPLQLGSQSVRGTGVRVDSPKSPSSGRLLVLKPVREKGVSPVVKDVQGQTTNVNNRVASGLSATAHSVASVHLKNSINPKLCSGERKPSGVSLNPGSVVDKRYQSRNDFFNLVRKKSMNTSGTADSGTALSSDMVDKSDKEVKGMPNAEVIPSEMGTEVKRNGETCTEAVSFSHLTEDDYAFIYPTEEERELLRSLGWEEEDAEDFEAITEEEISAFYQRVLTDRRATAKLCRGLWPKILSHFELRAACSGAASTEPSASPSQTEA*

Click here to download the sequence:
Link to NCBI Protein BLAST