Transcript Information: R_Transcript_179178.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value5.1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0667314843667
Replicate 20.23859432291248
Replicate 30.40904888564558
Condition 2: 8 Hour
Replicate 10.39749780758515
Replicate 20.32670119573161
Replicate 30.88400701073313
Condition 3: 24 Hour
Replicate 10.33542250819698
Replicate 20.10741197511645
Replicate 30.56851181004928


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179178.p1 GENE.R_Transcript_179178~~R_Transcript_179178.p1 ORF type:complete len:616 (-),score=71.47 R_Transcript_179178:254-2101(-)
ATGAAGATATATTGCAAGTTTTGTATGAATAATTCATTTGCAACAAAATATAATGCCTTGCAGATTAAAGGCGCTCAGCGCTCTCATTCAATGGACCACCATCAGCGATGCAACCTCAACCTCAATCTCGACCAAAATTCTTCCACCGTGCCTTGGGAAGCCATGTTTCGTTCTGCTTCTTTCAGAAGGTCTAATTTATCTCCTCGAGATCAAATTCCTACGATGGAGCACCAAACTCCAGTGGAAGAAATCAACACTGAAACGGAATCTCCTGAGAATTCTGCAGATAGCGCGATGAAATCAGAAGACAGCACTGTGACAAGTACACCTGCAGAGACTTCAGAAACCATGGAAATGGTATCTCAACTGAAGACGACTTCTCGTTGTGATTCTCCTATGTGGGTCGCTCTGTATGTTACCTTAGCTCAAGCAGGACTAGCCCTTGTGATATTTCTGTTTTACGGATTCTTCAAATTGCTCGAAGAATATATTCGTCCGATTATTTGGGCAGCCTTGTGTTCAATTCCTTTGAGAGGAATCCAAGACATTCTCATCGATTTCTGGGCTGAGCCATTGACAGGTGGACTGATAGACACCTTTTTGGCAGTTCCAGTAGCTGTATTAAGGGCTTGTTCGGGTACAATAATTGATGCCCGTGAAGTGTTTTCTTGGGTCTTCTATGGTGAGAAGCTGGAGGATGTAACACCAGAGAAAAACGGCTTCCTGAGACTGTTCCGAAGGCTGGTTTCATTCAGTCTCTTTGTGTTTGCTTATGAGCAGATTGGCAGGTTTGGGGCTTGCACTCTCATCGGAGTAGCCTTCATGTTCAGCTCTAACCTCTCCTCGTCAACTATATCCGCAGTTTCTACTTTACGAAGTGACAGTTTTCGGTTAAGGAGCAACCCTACTACTTGCTCATCACCAGAAAGCAACCAGAAACTTCATCTACATAAGATTGGTAAGGTTATCAGTCACTGGATTCTTAGCAGGCTGAAAACAATATTAGCTGTGGCTCTGATTGTTGTAATGATCATTGGAACAATAGCTGGTGTAATCTTCTTTTCATACCAGATAGGAGCCGAAGGAAAGGATGCAGTGATTTCGATCAAATCCCACATTGAGGACAGCAAGTATGCAGAGAAGCTCGGTATCAAGAAATGGATATATGAGAACAATGCCATGGAGCTGATGGATTGGTACACTTCCGAATGCTATGGAACTCTATTACAGCAAATAGACACTTTTGCCTCCAAATACAACTTGTCAGAGCTTGTTGAAGTACTGAAGCAATTTGTGATCACCCCATACACCAATTTCTCCGAAACGCAGGAAACAAAGTACACATTGAAGCTCGGAAATCTGATGGAGAAGCCGGTTTTAGACAAGGCAAAGTGCTTTGCAACTCAAGGAATGGATCTTTCCTTCCGAATATTGGCAAGCAGCAAGTTCATCCTAGATGGAAGCGCGCATTTCCTGCTCTACATAGGCCAATCGATGGTGTCGGGAGCAGCAGGGCTAGTGCAGTTTCTGATACAATCAACTGTATTTTTCTGGGTTCTGTACTATCTTCTGACATCAGATTCCGGTGGAGTGACCGAGCAAATCATGAAAATCATACCAGCACCAACATCTACGAAAACCCGATGTGTTCAGGCTCTCAACAATGCAATCTCAGGGGTGCTATACAGAGATAGCATTTTTTCAGTGCTCTTTCACTTGGCTTCTTTGCAGGCTTTTCTCTATACACTTTGTGTATATGTCAACTATGCTTGCATTTATAAGCCCTTTGCTCCCTATTTTTCCATCTTGGCTACCAACAGTTCCAGGAGCTTTGCAATTAGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179178.p1 GENE.R_Transcript_179178~~R_Transcript_179178.p1 ORF type:complete len:616 (-),score=71.47 R_Transcript_179178:254-2101(-)
MKIYCKFCMNNSFATKYNALQIKGAQRSHSMDHHQRCNLNLNLDQNSSTVPWEAMFRSASFRRSNLSPRDQIPTMEHQTPVEEINTETESPENSADSAMKSEDSTVTSTPAETSETMEMVSQLKTTSRCDSPMWVALYVTLAQAGLALVIFLFYGFFKLLEEYIRPIIWAALCSIPLRGIQDILIDFWAEPLTGGLIDTFLAVPVAVLRACSGTIIDAREVFSWVFYGEKLEDVTPEKNGFLRLFRRLVSFSLFVFAYEQIGRFGACTLIGVAFMFSSNLSSSTISAVSTLRSDSFRLRSNPTTCSSPESNQKLHLHKIGKVISHWILSRLKTILAVALIVVMIIGTIAGVIFFSYQIGAEGKDAVISIKSHIEDSKYAEKLGIKKWIYENNAMELMDWYTSECYGTLLQQIDTFASKYNLSELVEVLKQFVITPYTNFSETQETKYTLKLGNLMEKPVLDKAKCFATQGMDLSFRILASSKFILDGSAHFLLYIGQSMVSGAAGLVQFLIQSTVFFWVLYYLLTSDSGGVTEQIMKIIPAPTSTKTRCVQALNNAISGVLYRDSIFSVLFHLASLQAFLYTLCVYVNYACIYKPFAPYFSILATNSSRSFAISA*

Click here to download the sequence:
Link to NCBI Protein BLAST