Transcript Information: R_Transcript_179525.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31689168324165
Replicate 20.2916152835597
Replicate 30.15907456663995
Condition 2: 8 Hour
Replicate 10.25506109320047
Replicate 20.69877755753705
Replicate 30.44118498035663
Condition 3: 24 Hour
Replicate 10.079714608429528
Replicate 20.30632304014691
Replicate 30.60799179685826


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179525.p1 GENE.R_Transcript_179525~~R_Transcript_179525.p1 ORF type:complete len:288 (+),score=39.18,RVT_1|PF00078.23|1.1e-13 R_Transcript_179525:889-1752(+)
ATGAACTGTATATTAGGAGCTATGTTTTCTGTTTGCTTGAATGGTGTGCCTCATGGGTATTTTAAAAGTGGCAGGAGCCTTACACAAGGGGACCGTATCTCCCCTTATTTGTTTGTAGTTGGCATGGAGGTTCTTACTAGAATGGTGAAGAGGATCAGGGACCAACAACTGATTAGATCACATCCCAAGTGCCACAGAATATCCCTTTCTCAGTTTTCTTTTGCTGATGATTTGTTGCTGTACACTAAGGGTGATGAGCAATCTGTTTTAAACATGGTACATTGTCTGCAAACTTTTGGTGAGGTGTCTGGGCTTAGGCCTAATCCTGAGAAGACCAATGTATACTTTGCAGGGGTCAAAGATGATATCAAGCAAAACATCTTGCTTAAAACTGGGTTTAGCCAAGGTGTGTTCCCTTTCAGATTTTTGGGAGTACCTTTGTGTGCTTCTAGAATTAGAAAGAATCAGTTCTCCCCTCTGATGGATAAAGTCAGATCTTGCCTACATAATTGGTCCATTGCCCAGCTTTCTTATGCAGGTAGAATTCAGTTGATTAATTCTGTTATCTTTGGCATTATGTCCTTTTGGTGTGCTATTCTGGTAATTCCAAAAGGATTCATTTCTGAGAATGAAAAGGAGTGTAGAAGGTTCTTATGGGGCATTAAAGATGGTAAATCCATTAAATACTGGGCTGGATGGGGGATGATATGCAGACCTAAGATGGAAGCAGGCATGGGTATAAAGGAGATCCTTAGTTGGAACAAAGCTTGTTTAGCTAAATGGATTTGGATGTGTACCAAGGGGGAGACTTCTCTCTGGTCTTCTTGGGCTAATAGATACTATCTCAAGCACACTAATGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179525.p1 GENE.R_Transcript_179525~~R_Transcript_179525.p1 ORF type:complete len:288 (+),score=39.18,RVT_1|PF00078.23|1.1e-13 R_Transcript_179525:889-1752(+)
MNCILGAMFSVCLNGVPHGYFKSGRSLTQGDRISPYLFVVGMEVLTRMVKRIRDQQLIRSHPKCHRISLSQFSFADDLLLYTKGDEQSVLNMVHCLQTFGEVSGLRPNPEKTNVYFAGVKDDIKQNILLKTGFSQGVFPFRFLGVPLCASRIRKNQFSPLMDKVRSCLHNWSIAQLSYAGRIQLINSVIFGIMSFWCAILVIPKGFISENEKECRRFLWGIKDGKSIKYWAGWGMICRPKMEAGMGIKEILSWNKACLAKWIWMCTKGETSLWSSWANRYYLKHTNV*

Click here to download the sequence:
Link to NCBI Protein BLAST