Transcript Information: R_Transcript_179749.p1


Annotated TAIR IDAT3G05130.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1); Has 171032 Blast hits to 82560 proteins in 3364 species: Archae - 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365; Plants - 9598; Viruses - 592; Other Eukaryotes - 39097 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1433475-1435379 | Reverse length=634
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39680349901563
Replicate 20.34233098504834
Replicate 30.68471226510238
Condition 2: 8 Hour
Replicate 10.39922605892248
Replicate 20.36457959523672
Replicate 30.19730011543899
Condition 3: 24 Hour
Replicate 10.12477069145491
Replicate 20.41952938107076
Replicate 30.83268441743631


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179749.p1 GENE.R_Transcript_179749~~R_Transcript_179749.p1 ORF type:complete len:368 (+),score=69.74 R_Transcript_179749:150-1253(+)
ATGGCGATTTACAACTTAGATGAAACCCCTAATGTATTCATTTGTCCTACTAATTGGGATGACAAATTCCTTTATACAATGTGGCGTGTTCAAAGTCTAGAGAAACGGGAAGAAATCCGTCAAATAGATTTGAGAGAGGATAAGTTGATTTTTCATGGAGGTGAGATTAAAGAATCTCAAGCAGAAAAATTGCATCATTCTTTGACATTGAATAATATAGCAGGGGATATTTTTGTTAATTGCAATGGAGCTACCTATATTCGTACATTTAAAACGGGTTTTTGTATGCCCAGTCATAATGTCATCTTCGATTGGTCTTCCTATGGAGTTTCGATACCAAATTCTGCCATTGATTGCTTGAAAAAAGAGTTGGGTGAAAAGGAGAAGGAGATGGTTGATATGAAACGCCAACTTTCTTGTGTTGAGGACGCTTTGAAAGCGTCAAAGAAAGATGTCATGGAGGTTAACGAGAAACAATTGAAGTGTAGAAAGTGTCAACAGGACACGGAGATTGAGTTGAAGAAGGTACGTCATCAGCTTTCTTGCATTAAATTTGAGTTAGAAGTTCATAGGATTGAGTTGGAGTCGTGTAAGAAAGAGCAGATAAAGCTCGAAGACATTCTTTCTACTGATATCGAAGAAAACGAAAACATGGAGCTGAATTCCGAGAATGCGCAACATCAACTTTCTTCAACTAAATGTGAATTACAAGCAACGATGGCCCAGTTGGAGCATTCGAAGGAAAGGATGGCGGACCTCGAGGAACAGATTTCCACCTGCAAGAAGGAAAGCCAAGAAAAGGATGTTCAGCTTTTTTCGATTACTTCTGAGTTAAGTAATAGTAAATCACTGTTAGAAGCCTCCAACAGAAGCATAAAAGAACTTGAGGGTCAAGTTTCTTATTCAAGGAAGGAATGTCAAGATACAAGAATGGAACTATGCAAGATACAAGATCAACTTTGCTCAACTAAATTGGAGTTTGAGGAACAAGTTGCCATTTGTAAGCTAGAAAGACAACAAATGGAAGAGGAACTACAAAGGATGAAAGATCAACTTTGTTTGGCTAAAAATGAGTTGCTATCCAACAAGGAGAAATTGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179749.p1 GENE.R_Transcript_179749~~R_Transcript_179749.p1 ORF type:complete len:368 (+),score=69.74 R_Transcript_179749:150-1253(+)
MAIYNLDETPNVFICPTNWDDKFLYTMWRVQSLEKREEIRQIDLREDKLIFHGGEIKESQAEKLHHSLTLNNIAGDIFVNCNGATYIRTFKTGFCMPSHNVIFDWSSYGVSIPNSAIDCLKKELGEKEKEMVDMKRQLSCVEDALKASKKDVMEVNEKQLKCRKCQQDTEIELKKVRHQLSCIKFELEVHRIELESCKKEQIKLEDILSTDIEENENMELNSENAQHQLSSTKCELQATMAQLEHSKERMADLEEQISTCKKESQEKDVQLFSITSELSNSKSLLEASNRSIKELEGQVSYSRKECQDTRMELCKIQDQLCSTKLEFEEQVAICKLERQQMEEELQRMKDQLCLAKNELLSNKEKLE*

Click here to download the sequence:
Link to NCBI Protein BLAST