Transcript Information: R_Transcript_179840.p1


Annotated TAIR IDAT5G04170.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1145579-1147519 | Forward length=354
E-Value7.2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7383772337827
Replicate 23.2494274453795
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 12.0404887456038
Replicate 21.597205845799
Replicate 32.8091778341075
Condition 3: 24 Hour
Replicate 11.093228915605
Replicate 20.52512521168041
Replicate 32.8662470423318


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179840.p1 GENE.R_Transcript_179840~~R_Transcript_179840.p1 ORF type:5prime_partial len:84 (+),score=5.69 R_Transcript_179840:1-252(+)
GATTTGCTTGTCTCCAAGTTTGATAAGACTGGGGGGAAGAGTAGGGCTATCGAATATGATAACTTCATCGAGTGCTGCCTCACAGTAAAGGTACGTCTCTGTACTTGTTCTCTATTTAGTTATGCCCTCCATGGTTTTGGTTTCCCTCTTGTAAACATGGGTTTAGCATTTTCCCCGTTAACCCAATCTGCAATGTTAAATGTAGCCTGTCAAAAATCCACCAACTTCTGGATGAAACCTTCCTTCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179840.p1 GENE.R_Transcript_179840~~R_Transcript_179840.p1 ORF type:5prime_partial len:84 (+),score=5.69 R_Transcript_179840:1-252(+)
DLLVSKFDKTGGKSRAIEYDNFIECCLTVKVRLCTCSLFSYALHGFGFPLVNMGLAFSPLTQSAMLNVACQKSTNFWMKPSFS*

Click here to download the sequence:
Link to NCBI Protein BLAST