Transcript Information: R_Transcript_179847.p2


Annotated TAIR IDAT1G26240.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9078140-9079576 | Reverse length=478
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11198135555042
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1113595743582
Condition 3: 24 Hour
Replicate 10.14084544311475
Replicate 20.40592501025602
Replicate 30.13428039685213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179847.p2 GENE.R_Transcript_179847~~R_Transcript_179847.p2 ORF type:5prime_partial len:163 (+),score=17.07 R_Transcript_179847:2-490(+)
TGGAGCAGTCCCCCGAAGAAACCACAGGCCATAGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCGGGAATTATGGAAGTCCTAACAATCGATGGGGCAGCCCTCCTAAGGAACCACGGGCCATTGGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCTCGAAGAAACCGCAGGCCATGGGAAGTCCTAACAATCAATGGGGCAACCCTCCAAAGAAACCTCAGGTCATCGGGGATTATGGAAGTCCTAAGAATCGATGGGGCAGCCCTCCTAAGAAACCACAGGACATCCGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCTCGAAGAAACCGCAGGCCATGGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCAGGGATTATGAAAGTCCTAACAATCGATGGGGCAGCCCTTCTAAGAAACCACAGGCCATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179847.p2 GENE.R_Transcript_179847~~R_Transcript_179847.p2 ORF type:5prime_partial len:163 (+),score=17.07 R_Transcript_179847:2-490(+)
WSSPPKKPQAIGSPNNQWGSPPKKPQVIGNYGSPNNRWGSPPKEPRAIGNYGSPNNRWSSPSKKPQAMGSPNNQWGNPPKKPQVIGDYGSPKNRWGSPPKKPQDIRNYGSPNNRWSSPSKKPQAMGSPNNQWGSPPKKPQVIRDYESPNNRWGSPSKKPQAI*

Click here to download the sequence:
Link to NCBI Protein BLAST