Transcript Information: R_Transcript_179849.p1


Annotated TAIR IDAT5G59170.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23882045-23882911 | Forward length=288
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.08372917869137
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.1025728524825
Replicate 30.16652853780172
Condition 3: 24 Hour
Replicate 10.31593312698675
Replicate 20.1011709123421
Replicate 30.10040231507751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179849.p1 GENE.R_Transcript_179849~~R_Transcript_179849.p1 ORF type:complete len:436 (+),score=51.28 R_Transcript_179849:223-1530(+)
ATGGGGCAAAAATATATCTGCACAAAAATTAGAAACCTAAACTACATGTCTTCCTATGATTATACAAGTAAATCCGGCTATGGCCACAGTCTTGGAAATCACACATATGTTACAAAAGTCGAGGCATATGTTGAAGAAATCCGCAGACCTACAGCCATAAGGTACACCTACCCCTACTACTATCCTGTGAAAGTAGAGAATTCAAAGGAAACTAAACCTAACAATAACTATGGTCGTCCTCGAGAGGTTGATGCGTTCTTGTCAAAAATTCTTTCTGAAGTCAATGGTTCTCCCCCAAGGACCATTCGCCCTGATTCAATGGCCAATTCGAGTCATCATATTGTTCCTGTAAAGGTGGGAAGTGTAGGTAAATTTAGAGCTGATCCTTGGCATAGGGACCACGGTTCTGATTACAAGTATGGTAGCTCTCCTACAAGACCAGAGGCTCCATCAGAATATGGAGCACCTACCCGCCAGCATGGTAGGCCTCCGAGCTATGATTATGATCATCTACCCCAAACAGAGTACAATTCTCCTAAATACCAATGGGGTAGATCATCATATCCTGATCATGATTACCCACCTCAAAGGGACTATATTGTTCCTGACAATCAACTGGGAAACCCTTCTATGAAGCAAGGATCTCCAAAGAATCATGGAGTCCCTAAGGGCAACTCTCCTGTGAAGGTGTATCATTCAGGGGTGTATGGAATTCCCAAAAAAGGTAGCTCTCCTATGAAGTATCACACTAAACAAGACTATGGTGTTCCTTTAAATCCAGGGACTCCAAACAACCGATGGGGTAGCCCTCCTAGAAAGACAGAGACTATGGAGAGTTATAGAGTTCCTAACAATAGATGGGGCAGCCCTCCAAAGAAGTCCCATTCTCCGGTGAATAATGGAGCTCCTAACAACCAATGGAGCAGCCCTTCTAAGATGTCATGGGTTTTGGAAAATTATGGAGTTCCTAACAGCCAATGGGGTAGCCTTCCTAAGAAGACCCAGTCTTCGGTGAGTTACGGAGTTCCTAACCAACGGGGCAACAATCGAAGGGGTAGCCCTCCTACGAAGTCGTCGAACTATAGAGCTCCTAACAACCGATGGACCAGCCCTCCTAAGAAACCACAGGCCATCGGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCTCGAAGAAACCGCAGGCCATGGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCAGGGATTATGAAAGTCCTAACAATCGATGGGGCAGCCCTTCTAAGAAACCACAGGCCATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179849.p1 GENE.R_Transcript_179849~~R_Transcript_179849.p1 ORF type:complete len:436 (+),score=51.28 R_Transcript_179849:223-1530(+)
MGQKYICTKIRNLNYMSSYDYTSKSGYGHSLGNHTYVTKVEAYVEEIRRPTAIRYTYPYYYPVKVENSKETKPNNNYGRPREVDAFLSKILSEVNGSPPRTIRPDSMANSSHHIVPVKVGSVGKFRADPWHRDHGSDYKYGSSPTRPEAPSEYGAPTRQHGRPPSYDYDHLPQTEYNSPKYQWGRSSYPDHDYPPQRDYIVPDNQLGNPSMKQGSPKNHGVPKGNSPVKVYHSGVYGIPKKGSSPMKYHTKQDYGVPLNPGTPNNRWGSPPRKTETMESYRVPNNRWGSPPKKSHSPVNNGAPNNQWSSPSKMSWVLENYGVPNSQWGSLPKKTQSSVSYGVPNQRGNNRRGSPPTKSSNYRAPNNRWTSPPKKPQAIGNYGSPNNRWSSPSKKPQAMGSPNNQWGSPPKKPQVIRDYESPNNRWGSPSKKPQAI*

Click here to download the sequence:
Link to NCBI Protein BLAST