Transcript Information: R_Transcript_17991.p1


Annotated TAIR IDAT1G67960.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25480808-25484176 | Reverse length=624
E-Value3.3E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.840013912975
Replicate 211.765168336719
Replicate 312.124773175895
Condition 2: 8 Hour
Replicate 18.7389207656548
Replicate 210.910568208716
Replicate 313.081677998831
Condition 3: 24 Hour
Replicate 112.3101345652
Replicate 29.8107875754637
Replicate 313.547734452752


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17991.p1 GENE.R_Transcript_17991~~R_Transcript_17991.p1 ORF type:complete len:580 (+),score=95.66,DUF747|PF05346.7|3.5e-86 R_Transcript_17991:179-1918(+)
ATGATGGGGTTGAGATCCAAAGGAAAGCAACTCTCATTTGAGATCCTCACCTCTCCTTCCGCCGCTTCAGTCAACGGCACCACTGACTGGACCACCACCTCCGACGACGACAAGCAGCAACCTCCTAATCGCAATCGTCGTAAACGCAAGCATAAGAAACCCAAGAAGAACCACAACAATAACAACAACCCAATCAATCCCATTCTCGAGGATGATGATGATGATCGCGTTCAGTCCACTTCTCAGAGTTTCGTGCAACAGGAGAGTGGTGTCGGTACAGTTTGTCAGGTCTTGTATGGCGGTGAATTGCGGCAGAGAACAATTAATGGTGTGGTTTCCGAAGAATCAAAGTCACAGTCACAGTTACCGCCGGTCATAGAAAATGAAAAGGAAAGGGAAAAAGAACATTCAAGAGAGGAGGTAATTTCGAGACCTAATCAAAATACTAATGGCAGGTTGGAGACTGCTGAGTCCTTAGATTGGAAACGCTTCACGGCAGATGATGCTACCTATCCTTTGCCCATGGAGAATTCACCGATAAAGTACTTCATGGAAGAAATTGATAGTGGATATGCACTAAGGAGCACAACAACACTGGGGAATGAGAAAGAACGAGAGAGAGTCTATGATACTATCTTCCGCTTGCCTTGGAGGTGTGAGCTGCTTATTGATGTTGGCTTCTTCGTCTGTTTCAATTCATTTTTATCATTGCTAACAATCATTCCAATGAGAGCTCTAAGGACATTAGGGAGATTCTTCACTGGAAGGCAGCTCAAAAAGCCTTCTTCTGCGGAGCTGTCAGATATTGGGTGCCTCATGGTACTTGCTGGTGGAGTGATGCTTTTGGAGCGTACAGATATCAGCCTTATATATCATATGATCCGCGGTCAAGGAACTATCAAGCTTTATGTTGTCTACAATGTTTTAGAGATTTTTGATAAACTATGGCAAAGTTCCGGTGGTGATGTTTTCCAGACTTTATTTAATTCTGCTGAGGGGCTTGCATGCTGTTCCCCAGATTCGTCAAGATATTGGATTCAAAGATACATCAGTGATTTATTGCTGGCAGCGGCTGTCTCAATTGTTCATTCTTTTATATTATTAGCTCAGGCAATTACCTTGTCAACCTGTATAGTTGCTCACAATAATGCTTTACTGGCTCTTCTGGTCTCAAATAATTTTGCGGAGATAAAAAGCAATGTGTTTAAGAGATTCAGCAAGGATAATGTCCACAGCATTGTATATTCTGATTCGATTGAGAGGTTCCATATTACAGCATTTGTGTCATTTGTTTTAGCCCAAAATATTCTGGAGGCTGAGGGTCCTTGGTTCGGAAATTTTCTTTCAAATGCTCTCCTTGTTTATTTTTCTGAAGTGGGAATTGATATCATCAAACATTCATTTATTGCGAAATTTAACGACATAAAGCCAGTGACATTCTCTGAGTTTCTTGAAGACCTTTGCAAACAGACTCTGAACATTCAGACTGATGGAGCAAAAAGAAATCTCACTTTTGTTCCTGTGGCCCCAGCATGTGTGGTCATCAGGGTGCTGACCCCCATATACACTGCTCGTCTTCCCTGTGGTCCCCTTCCTTGGAGACTTTTCTGGATAATTATTTTGACAACATTGACTTACGTGATGCTTGCGAGCCTGAAGGTGATGATAGGAATGGGGCTTCAAAAGCACGCAGCTTGGTACATTAGAAGATGTGAAAAGAGGAAACTTCACTCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17991.p1 GENE.R_Transcript_17991~~R_Transcript_17991.p1 ORF type:complete len:580 (+),score=95.66,DUF747|PF05346.7|3.5e-86 R_Transcript_17991:179-1918(+)
MMGLRSKGKQLSFEILTSPSAASVNGTTDWTTTSDDDKQQPPNRNRRKRKHKKPKKNHNNNNNPINPILEDDDDDRVQSTSQSFVQQESGVGTVCQVLYGGELRQRTINGVVSEESKSQSQLPPVIENEKEREKEHSREEVISRPNQNTNGRLETAESLDWKRFTADDATYPLPMENSPIKYFMEEIDSGYALRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFNSFLSLLTIIPMRALRTLGRFFTGRQLKKPSSAELSDIGCLMVLAGGVMLLERTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLWQSSGGDVFQTLFNSAEGLACCSPDSSRYWIQRYISDLLLAAAVSIVHSFILLAQAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRFSKDNVHSIVYSDSIERFHITAFVSFVLAQNILEAEGPWFGNFLSNALLVYFSEVGIDIIKHSFIAKFNDIKPVTFSEFLEDLCKQTLNIQTDGAKRNLTFVPVAPACVVIRVLTPIYTARLPCGPLPWRLFWIIILTTLTYVMLASLKVMIGMGLQKHAAWYIRRCEKRKLHSD*

Click here to download the sequence:
Link to NCBI Protein BLAST