Transcript Information: R_Transcript_179966.p1


Annotated TAIR IDAT1G54530.1
Annotated Gene NameCalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20366505-20366888 | Forward length=127
E-Value4.8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8013286755308
Replicate 212.207151404825
Replicate 39.7664385099875
Condition 2: 8 Hour
Replicate 12.6573806919491
Replicate 21.9067418624267
Replicate 31.8292320780235
Condition 3: 24 Hour
Replicate 11.4237399831134
Replicate 24.4452459779458
Replicate 33.3934425871159


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179966.p1 GENE.R_Transcript_179966~~R_Transcript_179966.p1 ORF type:complete len:129 (+),score=27.17,EF-hand_6|PF13405.2|0.079,EF-hand_6|PF13405.2|0.14 R_Transcript_179966:151-537(+)
ATGATAGCAATGATAGACGGTCCAATGATCAACCAATTTGTTAAAAACACCGAGGCATTTAACAAATGTGCCGAAGAAAGATTCAAGATGCTTGATATTGATGGAGGTGGGTTTCTCTCTCGAAGTGATCTCCCTCGAGGTGGGCTTGGGAAATGGTTACTTGCTATGGATGGTGAACCTCAGGCTGATGATGAAGATATGAGGATATCTTATGATTCGATTTTTCATAAATTCGATAATCCGAATAATACTATAGATCGTGAGAAATTTAAGTCCATGTTGATGGAGATCTTGTTAGCTATGGCTCGAGGGATTGGTAATACCCCAGTTAATGTTCTTGTTGATGAAGATAGTTTGCTTTTGAAGGCATGTACTCAAAGTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179966.p1 GENE.R_Transcript_179966~~R_Transcript_179966.p1 ORF type:complete len:129 (+),score=27.17,EF-hand_6|PF13405.2|0.079,EF-hand_6|PF13405.2|0.14 R_Transcript_179966:151-537(+)
MIAMIDGPMINQFVKNTEAFNKCAEERFKMLDIDGGGFLSRSDLPRGGLGKWLLAMDGEPQADDEDMRISYDSIFHKFDNPNNTIDREKFKSMLMEILLAMARGIGNTPVNVLVDEDSLLLKACTQSN*

Click here to download the sequence:
Link to NCBI Protein BLAST