Transcript Information: R_Transcript_179991.p1


Annotated TAIR IDAT4G17615.1
Annotated Gene Namecalcineurin B-like protein 1
Annotated Gene Symbol(s)CBL1, ATCBL1, SCABP5
Annotation TypeOrtholog
Chromosome Positionchr4:9817142-9818995 | Forward length=213
E-Value6.5E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1116.68247937409
Replicate 291.638058826273
Replicate 3117.20970872798
Condition 2: 8 Hour
Replicate 151.603388276671
Replicate 273.352051647254
Replicate 380.070656194604
Condition 3: 24 Hour
Replicate 1114.46719771944
Replicate 275.338290883234
Replicate 397.574160146262


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_179991.p1 GENE.R_Transcript_179991~~R_Transcript_179991.p1 ORF type:complete len:214 (+),score=40.27,EF-hand_1|PF00036.28|2.4,EF-hand_1|PF00036.28|0.018,EF-hand_1|PF00036.28|7.5e-06,EF-hand_1|PF00036.28|2.5e-06,EF-hand_5|PF13202.2|1.3,EF-hand_5|PF13202.2|7.9,EF-hand_5|PF13202.2|0.0016,EF-hand_5|PF13202.2|7.9e-08,EF-hand_6|PF13405.2|1.8,EF-hand_6|PF13405.2|0.15,EF-hand_6|PF13405.2|5.4e-05,EF-hand_6|PF13405.2|0.0044,EF-hand_7|PF13499.2|2.1e+02,EF-hand_7|PF13499.2|5.2,EF-hand_7|PF13499.2|3.4e-06,EF-hand_7|PF13499.2|3.4e-10,EF-hand_8|PF13833.2|1.5e+03,EF-hand_8|PF13833.2|0.0054,EF-hand_8|PF13833.2|0.15,EF-hand_8|PF13833.2|0.0046 R_Transcript_179991:477-1118(+)
ATGGGCTGCTTCCATTCAACCGCTGGCAGGCAATGGCCTGGTCATGAGGACCCCGTGTATCTTGCTTCCCAAACAGCTTTTAGTGTTAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATAAGCAGTTCTGTGATTGATGATGGGCTTATAAGCAAGGAGGAATTCCAGCTAGCTTTATTCAAGAACAAAAAGAAGGAGAATCTATTTGCTAACCGGGTCTTTGATCTGTTTGATGCGAAGCAGAAGGGAGTCGTCGACTTTGGTGACTTTGTTAGAACACTAAATGTTTTCCATCCAAATGCTGCTCAAGAAGACAAGATAGAGTTTACATTTAGGCTTTACGATCTCGATGGTACAGGATTTATTGAGCGTCAAGAGGTGAGGCAAATGTTAATTGCAATTCTGTGTGAATCTGAGTTGAAGTTGGCGGATGAAACGATTGATATTATACTTGATAAGACATTCCAAGAAGCCGATGTAAATCAAGATGGAAAAATCGATAGAGCTGAGTGGCATCAGTTTGTATCCAGAAATCCTTCATTATTGAAAATAATGACCCTTCCATATCTCAGGGACATAACGACGACATTTCCAAGTTTTGTGTTTCACTCTGAAGTGGATGAAATGGCTACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_179991.p1 GENE.R_Transcript_179991~~R_Transcript_179991.p1 ORF type:complete len:214 (+),score=40.27,EF-hand_1|PF00036.28|2.4,EF-hand_1|PF00036.28|0.018,EF-hand_1|PF00036.28|7.5e-06,EF-hand_1|PF00036.28|2.5e-06,EF-hand_5|PF13202.2|1.3,EF-hand_5|PF13202.2|7.9,EF-hand_5|PF13202.2|0.0016,EF-hand_5|PF13202.2|7.9e-08,EF-hand_6|PF13405.2|1.8,EF-hand_6|PF13405.2|0.15,EF-hand_6|PF13405.2|5.4e-05,EF-hand_6|PF13405.2|0.0044,EF-hand_7|PF13499.2|2.1e+02,EF-hand_7|PF13499.2|5.2,EF-hand_7|PF13499.2|3.4e-06,EF-hand_7|PF13499.2|3.4e-10,EF-hand_8|PF13833.2|1.5e+03,EF-hand_8|PF13833.2|0.0054,EF-hand_8|PF13833.2|0.15,EF-hand_8|PF13833.2|0.0046 R_Transcript_179991:477-1118(+)
MGCFHSTAGRQWPGHEDPVYLASQTAFSVSEVEALFELYKSISSSVIDDGLISKEEFQLALFKNKKKENLFANRVFDLFDAKQKGVVDFGDFVRTLNVFHPNAAQEDKIEFTFRLYDLDGTGFIERQEVRQMLIAILCESELKLADETIDIILDKTFQEADVNQDGKIDRAEWHQFVSRNPSLLKIMTLPYLRDITTTFPSFVFHSEVDEMAT*

Click here to download the sequence:
Link to NCBI Protein BLAST