Transcript Information: R_Transcript_180005.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value9.1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8203577957177
Replicate 20
Replicate 31.0295162964563
Condition 2: 8 Hour
Replicate 10.55024415611787
Replicate 20.50249172676821
Replicate 30.40790136225589
Condition 3: 24 Hour
Replicate 10.77385867059677
Replicate 20.24781189764694
Replicate 30.49185853228983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180005.p1 GENE.R_Transcript_180005~~R_Transcript_180005.p1 ORF type:internal len:89 (+),score=9.36 R_Transcript_180005:1-264(+)
ACAAAAGGATGGGGGAGAGGATATGGACTCCATGGTTTATTAAATTTTTTCATTCTCGTGGCTATTTCAATTTCTGTTCAAATTTTCTCCACGAAAGGGCTCTTAGCGTTTCTCACAGAGATGGTGGTGTTAACTGAAAATTCTATTGATATCAGCCGTCTGGACATGCAATCATTTAGTCTGCAGTGGTATGATTTCTGCTTCAAAAAATTCCTTCTCGGGAGAGTTGCAAAGAAGCTTCATGATGTTGGCCCTATCCTTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180005.p1 GENE.R_Transcript_180005~~R_Transcript_180005.p1 ORF type:internal len:89 (+),score=9.36 R_Transcript_180005:1-264(+)
TKGWGRGYGLHGLLNFFILVAISISVQIFSTKGLLAFLTEMVVLTENSIDISRLDMQSFSLQWYDFCFKKFLLGRVAKKLHDVGPILQ

Click here to download the sequence:
Link to NCBI Protein BLAST