Transcript Information: R_Transcript_180007.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value2.4E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4934240781134
Replicate 20.95437729164991
Replicate 31.4577014833915
Condition 2: 8 Hour
Replicate 12.0033889502292
Replicate 22.0328074401078
Replicate 32.9702635560633
Condition 3: 24 Hour
Replicate 12.5044880612041
Replicate 22.2055258890577
Replicate 32.1887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180007.p1 GENE.R_Transcript_180007~~R_Transcript_180007.p1 ORF type:5prime_partial len:110 (-),score=17.60 R_Transcript_180007:20-349(-)
GAGATGAAGCCGTTTCTTGAGGGAATGGTTACAACAGGATGGTACAAAAGGATGGGGGAGAGGATATGGACTCCATGGTTTATTAAATTTATTCATTCTCGTCGCTATTTCAATTTCTATTCAAATTTTCTCCATGAAAGGGCTCTTAGCATCTCCCACAGAGATGCTGGTGTTAACTATGGGAAGACAGCAGGTCCAGATTCAGAACTATTGACCGAAAATTCTATTGATATCAACCGTCTGGACATGCAACCACTGAGTAGTCTGCAGTGGTATGATTTCTGCTTCAAAAAAATTCCTTCTCGGGAGAGTTGCAAAGAAGCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180007.p1 GENE.R_Transcript_180007~~R_Transcript_180007.p1 ORF type:5prime_partial len:110 (-),score=17.60 R_Transcript_180007:20-349(-)
EMKPFLEGMVTTGWYKRMGERIWTPWFIKFIHSRRYFNFYSNFLHERALSISHRDAGVNYGKTAGPDSELLTENSIDINRLDMQPLSSLQWYDFCFKKIPSRESCKEAS*

Click here to download the sequence:
Link to NCBI Protein BLAST