Transcript Information: R_Transcript_180077.p1


Annotated TAIR IDAT1G05570.1
Annotated Gene Namecallose synthase 1
Annotated Gene Symbol(s)CALS1, GSL06, ATGSL6, ATGSL06, GSL6
Annotation TypeHomolog
Chromosome Positionchr1:1647880-1658677 | Reverse length=1950
E-Value2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88133737773737
Replicate 20.26678907771662
Replicate 30.81497922832563
Condition 2: 8 Hour
Replicate 11.1200649785271
Replicate 20.93762274556433
Replicate 31.4991800385326
Condition 3: 24 Hour
Replicate 12.1295043553017
Replicate 20.7566607243273
Replicate 31.4740131491811


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180077.p1 GENE.R_Transcript_180077~~R_Transcript_180077.p1 ORF type:3prime_partial len:787 (+),score=96.96,Glucan_synthase|PF02364.11|1.6e-27,Glucan_synthase|PF02364.11|1.2e-60,FKS1_dom1|PF14288.2|8.1e-23 R_Transcript_180077:529-2886(+)
ATGCCAGAGTGTTTATGCTATATTTTTCACCAGATGGCATTTGAACTGCATGGCATGTTGGCTGGAAAGATCAGTCCCATTACTGGTGAGACTGTGAAACCAGCATGTGGCAGTGAGGAGGACGCCTTTTTGAGCAAAGTGGTGTTGCCGATATACGATGTGATTGCAAAGGAAGCTCAAATTGGCAAAAAAGGAAGAGCCGGTCATTCCAGCTGGAGGAACTACGATGATTTGAATGAATATTTTTGGACGGATCATTGTTTCCGGCTAGGTTGGCCATTGAGGCGTCATGTCGACTTCTTTGGTTTATCGGCCGAAGAACTCGACAACACAAATTGGGTGAGCAAACTTCTCGGTGACCATCGATGGATCGGGAAAGTTAATTTTGTTGAGATAAGGTCGTTCTGGCACATCATCAGAAGCTTTGACAGGATGTGGACCTTTTTTACACTGGCCTTGCATTGTATGATAATTGTTGCATGGCATGACTTTGGAAAAGTTGGTGCAACATTTGGAACTGAAGTCTGCAAAAACTTGTCGAGTGTTTTTGTAACAGCTTCAGTACTAAATCTTGGGCAAGCTGCTCTAGATATACTCTTCTTCTGGAGAGCAAGATGGTGCATGAAAAGAAACGTAAAGATCAGATATATACTGAAGTTTCTCATGGCGGCTACATGGGTTGGAGCTTTGGTTTTACTTTATGGCCGTCCATGGGTGGGAGCATACTTGGTGGCGAGTTTGGTGTACTTGCTACCAAATATGCTTTCGGCTCTTTTATTCTTCTTTCCATATTTGAGTCGAGTCCTAGAAAAATCTGATCAGAAGGTTATCGTACTGATGATGTGGTGGTCACAGCCACGACTTTATATTGGCAGGGGAATGCATGAAAGTGCATTTTCTCTATTGAAGTACACGATGTTCTGGGTAGTACTTCTAAGTATGAAGTTTGCATTCAGTTACCACCTAGAGATAAAACCTCTAGTAGGTCCAACAAAGGACATTCTATCACAAATGGTACATGGTAGCATTTTTGTAGAAGGGAAGAGGATAGGTGACCTGATTGCTCTATGGGGGCCAATCATTATTGTGTATTTCATGGATACCCATATTTGGTATGCTATATTCTCTGCTGCATGTGGAGGTATTATTGGCGCTTATAGCCGTCTTGGAGAGATATATACATTGAAACGGCTGCGTTCCTGGTTTCCTGCGCTGCCTCTGGCCTGCAATGTATCTCTTGTCGTCTCAGATGAAGTCGAAAGCTTGCGAGAGAAATTGCGTGACACTCACTTACCAGTTTCCCAGGTTCCATCACCTGATAAGGAAGTGCAATTTGTGCTCCTATGGAACACAATAATTCATAGTCTTAGACAAGAAGATTTGATTAGTGATAGGGAGTTGGAATCGCTACTCTTCCCAGATTGGACTGAGCAGACAAATGAATCAAAATGGCCAAGTTTTCTGAACAAGGATGATGTTCCCTCCAACAGGGAGGCTAGACGCCGACTTATGTCCTTTGCGAACTCATTGCTGATGGATATGCCATCCGCTACTGAAGTTCGCAAAATGCTTTCATTCTCTGTGTTGACCCCTTACTACGGAGAGGAGGTACTTTTCTCATTGAGTGATATCAAAACACAAAATGAAGATGGAGTATCAGTGCTGTCGTACTTGCAAAATATTTACTCAGATGAATGGGAAAACTTTCTGCAACGTATTGGATGCGAGAGAGAGGAAGATCTTAAAGATGAAGACATGGAAGACCTACGTCTTTGGGCATCATACAGAGGCCAGACTCTGACCCGTACTGTTAGAGGCATGATGTACTATCAGAAAGCCTTAGAACTTCAATCCTTCGTTGATATGACCGAGTCTGACGTTCTATTGGAAGGTCATAGGGCTATTGAAGCAAACTGTGAGGACAGCTTCAGAGCTGAAAGATTATTTTGCCAAGCTCTTGCTCGCACGAAGTTTACATATGTGGTATCCTGCCAGCAATATGGGATTCACAAAAGGTCTGGTGATCGACGTGCTGAGGAGATACTGAGGCTAATGAAAACATATCCATCACTCCGTGTGGCTTATGTTGATGAGGTTGAAGAGCCCAATCAAGACATGCCTCGAGAGACGACAAAGTGTTATTACTCTGTTCTTGTGAAAGCAGCTAAGCCGAAACCTTGCTGCTCCAGTGAGTTCGAGCAAGATCAAGATGAGGTCGTCTACCGAATCAAACTTCCAGGGAACCCCATCTTAGGTGAAGGAAAGCCTGAGAATCAGAATCATGCTATAATTTTCACACGCAGAGAAGGGTTGCAAACCATAGATATGAATCAGGATAACTACTTGGAAGAAGCTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180077.p1 GENE.R_Transcript_180077~~R_Transcript_180077.p1 ORF type:3prime_partial len:787 (+),score=96.96,Glucan_synthase|PF02364.11|1.6e-27,Glucan_synthase|PF02364.11|1.2e-60,FKS1_dom1|PF14288.2|8.1e-23 R_Transcript_180077:529-2886(+)
MPECLCYIFHQMAFELHGMLAGKISPITGETVKPACGSEEDAFLSKVVLPIYDVIAKEAQIGKKGRAGHSSWRNYDDLNEYFWTDHCFRLGWPLRRHVDFFGLSAEELDNTNWVSKLLGDHRWIGKVNFVEIRSFWHIIRSFDRMWTFFTLALHCMIIVAWHDFGKVGATFGTEVCKNLSSVFVTASVLNLGQAALDILFFWRARWCMKRNVKIRYILKFLMAATWVGALVLLYGRPWVGAYLVASLVYLLPNMLSALLFFFPYLSRVLEKSDQKVIVLMMWWSQPRLYIGRGMHESAFSLLKYTMFWVVLLSMKFAFSYHLEIKPLVGPTKDILSQMVHGSIFVEGKRIGDLIALWGPIIIVYFMDTHIWYAIFSAACGGIIGAYSRLGEIYTLKRLRSWFPALPLACNVSLVVSDEVESLREKLRDTHLPVSQVPSPDKEVQFVLLWNTIIHSLRQEDLISDRELESLLFPDWTEQTNESKWPSFLNKDDVPSNREARRRLMSFANSLLMDMPSATEVRKMLSFSVLTPYYGEEVLFSLSDIKTQNEDGVSVLSYLQNIYSDEWENFLQRIGCEREEDLKDEDMEDLRLWASYRGQTLTRTVRGMMYYQKALELQSFVDMTESDVLLEGHRAIEANCEDSFRAERLFCQALARTKFTYVVSCQQYGIHKRSGDRRAEEILRLMKTYPSLRVAYVDEVEEPNQDMPRETTKCYYSVLVKAAKPKPCCSSEFEQDQDEVVYRIKLPGNPILGEGKPENQNHAIIFTRREGLQTIDMNQDNYLEEAL

Click here to download the sequence:
Link to NCBI Protein BLAST