Transcript Information: R_Transcript_180114.p1


Annotated TAIR IDAT2G41120.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17141454-17142419 | Reverse length=261
E-Value3.2E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48215368559634
Replicate 20.39615661162826
Replicate 30.43220259615382
Condition 2: 8 Hour
Replicate 12.402386749541
Replicate 21.6032330376699
Replicate 33.9043086994795
Condition 3: 24 Hour
Replicate 10.6930658785722
Replicate 20.083227392039914
Replicate 30.57816578418219


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180114.p1 GENE.R_Transcript_180114~~R_Transcript_180114.p1 ORF type:complete len:265 (+),score=32.84,DUF309|PF03745.10|2.5e-21 R_Transcript_180114:243-1037(+)
ATGCTCTGTCAACCTCATCTCTCACCCTGCCCATCTCCTCTCCATATCCACCCACCGGGTACACGAAATTCTGGTGTTGTCTCTTTCAACAACTCCTCAAATTTGGTAAAACACATTGGCAGTCGCAGCAGGGAAAAATGCCGCCTGCTCCTTTGGAGAGCCTATCGTTCCATCTCGTATAGGCAGGATGAAGAGGAAGAGTCGAGCCATTATCTCTCGCCCTCTGATCGCTTGTTGAGGTTTGAAGAGGCAGTGAAGCTGTTCAACAAGAGCGAATACTATGCTTGCCACGACTTGCTCGAGTCTCTCTGGTATGATTCAAATGACCCTCTTCGTACTCTTCTTCACGCCCTTCTTCAGTGTGCTGTTGCCTTCCATCACCTCTTCAACCAGAATCACAAGGGCGCGATGATGGAGATGGGTGAGGGTGTGTGCAAGCTTCGAAAGCTGAATTTCGAAGCAGGACCTTTTTATCAGTTTGAGCAGGAGATGTCTGCTGTCCTCAATTTTATCTACCGGACTCGGTTGGAGCTTGCTGCCTGTAATGAAGATTTTTGTGTTGCAATGGGACAAGACGAAAGATCATACCAGCTTCTTGAGGGGTATGGTGCTGGTCAACGCTTATATGTTATAGATCAAGAATTAAGCAACGAGGGTCACAATGGCATTATTAGTACATACATCGTCTTTGATCCTCAGATTTCCTACGGCGCCACAGGCGTTCCCTCAAGTAGAGTCAAGCTTCCAATCCTCCTAGCTACTCCTAATCAACTCATGGTATACATGGAATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180114.p1 GENE.R_Transcript_180114~~R_Transcript_180114.p1 ORF type:complete len:265 (+),score=32.84,DUF309|PF03745.10|2.5e-21 R_Transcript_180114:243-1037(+)
MLCQPHLSPCPSPLHIHPPGTRNSGVVSFNNSSNLVKHIGSRSREKCRLLLWRAYRSISYRQDEEEESSHYLSPSDRLLRFEEAVKLFNKSEYYACHDLLESLWYDSNDPLRTLLHALLQCAVAFHHLFNQNHKGAMMEMGEGVCKLRKLNFEAGPFYQFEQEMSAVLNFIYRTRLELAACNEDFCVAMGQDERSYQLLEGYGAGQRLYVIDQELSNEGHNGIISTYIVFDPQISYGATGVPSSRVKLPILLATPNQLMVYMEL*

Click here to download the sequence:
Link to NCBI Protein BLAST