Transcript Information: R_Transcript_180197.p1


Annotated TAIR IDAT5G47690.3
Annotated Gene Namebinding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19317899-19327014 | Forward length=1607
E-Value5E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.342807715438
Replicate 28.4721913960501
Replicate 312.926901625899
Condition 2: 8 Hour
Replicate 112.31452856996
Replicate 212.945773697528
Replicate 311.676474668085
Condition 3: 24 Hour
Replicate 112.821465440034
Replicate 29.3509138571161
Replicate 312.991824711813


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180197.p1 GENE.R_Transcript_180197~~R_Transcript_180197.p1 ORF type:5prime_partial len:342 (-),score=105.31 R_Transcript_180197:30-1055(-)
AAGAAGGGGACAAAGTTGGTAGACATAGAGAAAATTAACAATGATAGTGATGACAACTCTTTGGGATCTGCTAAGAGAAAGAGAAGAAGTGTTGCAGGATTGGCTAAGTGCACTTCAAAAGAAGGTAGCGGTCATACCACAGATTTGGTTGATTGCAGGATAAAAGTTTGGTGGCCAATGGATAAGCGGTTTTATGAAGGTGTAGTGAAATCTTATGATCCAGAGAAAAAGAAGCACGTGGTGTTATACGATGATGGGGATGTGGAAGTGCTACGTTTGGAAAAGGAACGCTGGGAGCTCATTGAAGATAGTAATAGGCCTAAAAAGAAGACAAATAGTATTGAAGGGCCTTCTAACACAATATCACCCAAGAAGAAAAGTAAGCCTTCAGATGGATCAGGGCAGAAGGGATCAAGGAAGAGATCATCTGTTGTCAAGGGGAAAAGATCTCAGAAGAAAACTTTGAAACGTGAAAAGAAAGGTGTGGCTAGAAAAACCACTGCCTCAGAGGAAGTAGAGAACAGATCGGGCATGTCAGATGTTGAACCAATTGTATCATCTGACGTTGATGAACTTAAGTCTGGTGATATTAAAGAGGACACACATGATGATGTGCATGCAAGCCCGGCATGTGATACCGAGGAGAAATCAGATAATGCATGGCAGGATGAAGAGAAAGAGGTCTCTGTGAGTGCTTCAGAGGACTCTGGCAGAGAAGCAAACTCCAGTCCAGAAGGTGAACCGAGAGGCATGGATGATAGTCCACATGATTCTCATGATTCTGACATGAGAAAATCACCTGAAGTAGACAATAATTCTGAAAAATCAAGTGGGCCCTCTCAAGAATGTAATGAGAAGCAAAATGACGAGGCTGATAGCGAACTCATAGTACAAAAGGATGATGCTTCCTGTGCTGGGGATGCTGAAGATGCTGACGACGAGCCTCTTGTATGCTTTCTTCTTTGTGGTGAATTTAATTTTGCAAAGCTATGTATTCTTGGCTTCTGTATTTTGACTTATGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180197.p1 GENE.R_Transcript_180197~~R_Transcript_180197.p1 ORF type:5prime_partial len:342 (-),score=105.31 R_Transcript_180197:30-1055(-)
KKGTKLVDIEKINNDSDDNSLGSAKRKRRSVAGLAKCTSKEGSGHTTDLVDCRIKVWWPMDKRFYEGVVKSYDPEKKKHVVLYDDGDVEVLRLEKERWELIEDSNRPKKKTNSIEGPSNTISPKKKSKPSDGSGQKGSRKRSSVVKGKRSQKKTLKREKKGVARKTTASEEVENRSGMSDVEPIVSSDVDELKSGDIKEDTHDDVHASPACDTEEKSDNAWQDEEKEVSVSASEDSGREANSSPEGEPRGMDDSPHDSHDSDMRKSPEVDNNSEKSSGPSQECNEKQNDEADSELIVQKDDASCAGDAEDADDEPLVCFLLCGEFNFAKLCILGFCILTYE*

Click here to download the sequence:
Link to NCBI Protein BLAST