Transcript Information: R_Transcript_180240.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74501881447832
Replicate 20.14283197562107
Replicate 30.3116562938252
Condition 2: 8 Hour
Replicate 10.33314101969041
Replicate 20
Replicate 30.4939213774255
Condition 3: 24 Hour
Replicate 10.31235111874427
Replicate 20.30007154953166
Replicate 30.74447975125501


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180240.p1 GENE.R_Transcript_180240~~R_Transcript_180240.p1 ORF type:complete len:147 (+),score=19.68 R_Transcript_180240:658-1098(+)
ATGGATAAGAGTTCATTTTTTTGTGGAGGTCTTTTAGAGCAGGATAAAAATGAAATACTAGGGATGCTGCATATGAAAGAGGGGTGCATGCCTGTTAGATATCTGGGGCTCCCACTCTCTCATAAGAAACTCTCGGTGGTGCAATGTATGGCTCTAGTGGATAGAATTTCATCCAAAGTTTCTTCCTGGACCATGAGATTCCTATCATATGCAGGCAGGGTTCAGCTGGTACAATATGTCATATTTGGTATTCAGGCCTTCTGGGCGCAAATTATGATGATTCCTAAGAAGGTGCTAAGGGTGGTGGAAGCAGTGTGTAGGAGCTTTATATGGACAAGCAAGGCAACAATATCGAGAAAAGCTTTAGTGGCTTGGGACAAAGTCACAACTCCCAAGAAAAAAAGGAGGCCTAGGATTGATGAATCTGTTGCTATGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180240.p1 GENE.R_Transcript_180240~~R_Transcript_180240.p1 ORF type:complete len:147 (+),score=19.68 R_Transcript_180240:658-1098(+)
MDKSSFFCGGLLEQDKNEILGMLHMKEGCMPVRYLGLPLSHKKLSVVQCMALVDRISSKVSSWTMRFLSYAGRVQLVQYVIFGIQAFWAQIMMIPKKVLRVVEAVCRSFIWTSKATISRKALVAWDKVTTPKKKRRPRIDESVAME*

Click here to download the sequence:
Link to NCBI Protein BLAST