Transcript Information: R_Transcript_180290.p1


Annotated TAIR IDAT5G12210.1
Annotated Gene NameRAB geranylgeranyl transferase beta subunit 1
Annotated Gene Symbol(s)AtRGTB1, RGTB1
Annotation TypeOrtholog
Chromosome Positionchr5:3947254-3949595 | Forward length=321
E-Value2.4E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9330176457047
Replicate 26.1373801216871
Replicate 38.1054609955616
Condition 2: 8 Hour
Replicate 18.0991707133196
Replicate 28.7723459530805
Replicate 310.890966372232
Condition 3: 24 Hour
Replicate 110.949108062443
Replicate 28.9917593938507
Replicate 39.8494671091038


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180290.p1 GENE.R_Transcript_180290~~R_Transcript_180290.p1 ORF type:complete len:260 (-),score=48.87,Prenyltrans|PF00432.17|0.00018,Prenyltrans|PF00432.17|2.4e-12,Prenyltrans|PF00432.17|1.3e-15,Prenyltrans|PF00432.17|3.4e-12,Prenyltrans|PF00432.17|1.8e-12 R_Transcript_180290:236-1015(-)
ATGTATGTACTTACTGATACTCTTGTCAAAATGCCGTTTGCAGGTGGATTTGGTGGTAATATTGGACATGATCCACATATTCTTTACACTCTCAGTGCAGTTCAAGTTTTAGCTCTTTTTGACAAGATAAATATTCTTGACATTGACAAGGTGTCAAACTATATTGCAGGATTGCAGAATGATGATGGATCCTTTTCTGGGGACATGTGGGGGGAAGTTGATACAAGGTTTTCATATATTGCGATATGCTGTCTGTCATTGTTACGCCAGTTGGACAGAATTGATGTGGAGAAGGCAGTAAACTACATAGTAAGCTGCAAAAACCTTGATGGGGGATTTGGGAGCACACCTGGTGGGGAGTCTCATGCAGGACAGATATTTTGCTGTGTGGGTGCCCTTGCCATAACGGGTTCTCTGCACCATGTTGACAAGGACCTTCTGGGTTGGTGGTTGTGTGAGCGTCAAGTCAAATCAGGTGGTCTAAATGGTCGACCAGAAAAGCTTCCAGATGTCTGCTACTCATGGTGGGTGCTTTCTAGCCTGATTATGATCGATAGAGTTCACTGGATTGACAGAGAGAAGCTTGTGAAATTCATATTAGACTGTCAGGACTTGGAGAAAGGAGGGATCTCAGACAGGCCAGATGATGCTGTCGATGTTTTTCACACCTACTTCGGAGTCGCTGGTCTCTCACTTCTACAGTACCCGGGAGTGACAGCCATAGATCCTGCCTATGCTTTACCAGTGGATGTGGTGAACAGGATACTGCTCAGATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180290.p1 GENE.R_Transcript_180290~~R_Transcript_180290.p1 ORF type:complete len:260 (-),score=48.87,Prenyltrans|PF00432.17|0.00018,Prenyltrans|PF00432.17|2.4e-12,Prenyltrans|PF00432.17|1.3e-15,Prenyltrans|PF00432.17|3.4e-12,Prenyltrans|PF00432.17|1.8e-12 R_Transcript_180290:236-1015(-)
MYVLTDTLVKMPFAGGFGGNIGHDPHILYTLSAVQVLALFDKINILDIDKVSNYIAGLQNDDGSFSGDMWGEVDTRFSYIAICCLSLLRQLDRIDVEKAVNYIVSCKNLDGGFGSTPGGESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDREKLVKFILDCQDLEKGGISDRPDDAVDVFHTYFGVAGLSLLQYPGVTAIDPAYALPVDVVNRILLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST