Transcript Information: R_Transcript_180358.p1


Annotated TAIR IDAT3G48420.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17929743-17931551 | Forward length=319
E-Value1.3E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8448603580195
Replicate 21.9844064417843
Replicate 32.3046412825397
Condition 2: 8 Hour
Replicate 12.015604736511
Replicate 21.0226013037128
Replicate 31.162145801915
Condition 3: 24 Hour
Replicate 11.7498328679652
Replicate 22.6896657183631
Replicate 31.8684625952229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180358.p1 GENE.R_Transcript_180358~~R_Transcript_180358.p1 ORF type:complete len:328 (+),score=83.14,HAD_2|PF13419.2|1.1e-17,Hydrolase|PF00702.22|1e-15,Hydrolase_like|PF13242.2|1.6e-08 R_Transcript_180358:246-1229(+)
ATGGCTTGCACTGTCATTTATCCTCCATCAACAACACCATCATCTTCAACCCACCAAATAACTTCACAAACAAAACTTCCCACCAAAATCAGTAGCTTTACCCACAACAATGCAAAGACCCTATCACCATCTTCTCTTTTAGGTAAAGCTGTAATATTTAGCAAACCAACATTCTCATTAAGGACAAACCCAGTTGAGAAGAGAAAAGGGTCAGTTCTTGTGAGATCTTCTGCTTCATCCTCTGGTCTTCCATCAGCCCTTCTCTTTGACTGTGATGGTGTGCTTGTTGATACTGAGAGAGATGGTCACAGAGTTTCTTTCAATGATACCTTTACTGAAAGGGGCCTAGGTGTCTCATGGGATGTAGATTTGTATGGTGAATTGCTCAAGATTGGTGGTGGTAAAGAAAGGATGACTGAATACTTCAATAAAGTGGGTTGGCCAGAAAAGGCTCCAGCCAGTGAAGCAGAAAGAAAAGACTTCATTGCTTCTCTACACAAGCGAAAGACGGAGCTATTTATGGCTCTCATTGAAAAGAAGCTGCTACCCCTACGGCCAGGAGTTGCAAAGCTGGTTGATCAGGCTTTGGGGAATGGAGTCAAAGTGGCTGTCTGCAGTACATCTAATGAGAAGGCGGTATCTGCGATAGTTTCATGCTTGTTGGGCCCTGAACGAGCAGAGAAGATTCAGATTTTCGCTGGAGATGTTGTTCCTCGTAAAAAGCCTGATCCTGCCATTTATGTGCTTGCATCTGAAACCCTAGGAGTTGACCCAGCAAGCTGCGTTGTCGTAGAGGACAGTGCCATAGGTCTCGCAGCAGCCAAAGCCGCAGGAATGAAGTGCATAGTGACCAAGAGCGGCTACACAGCAGATGAAGACTTTGAGAACGCAGATGCAGTTTATGATTGCATCGGAGATCCACCAGAGGAGAGGTTCAACTTGGATTTCTGTGCAAGCCTTCTAGCAAAGCAGCTTGCTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180358.p1 GENE.R_Transcript_180358~~R_Transcript_180358.p1 ORF type:complete len:328 (+),score=83.14,HAD_2|PF13419.2|1.1e-17,Hydrolase|PF00702.22|1e-15,Hydrolase_like|PF13242.2|1.6e-08 R_Transcript_180358:246-1229(+)
MACTVIYPPSTTPSSSTHQITSQTKLPTKISSFTHNNAKTLSPSSLLGKAVIFSKPTFSLRTNPVEKRKGSVLVRSSASSSGLPSALLFDCDGVLVDTERDGHRVSFNDTFTERGLGVSWDVDLYGELLKIGGGKERMTEYFNKVGWPEKAPASEAERKDFIASLHKRKTELFMALIEKKLLPLRPGVAKLVDQALGNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIQIFAGDVVPRKKPDPAIYVLASETLGVDPASCVVVEDSAIGLAAAKAAGMKCIVTKSGYTADEDFENADAVYDCIGDPPEERFNLDFCASLLAKQLAS*

Click here to download the sequence:
Link to NCBI Protein BLAST