Transcript Information: R_Transcript_18039.p1


Annotated TAIR IDAT5G27620.1
Annotated Gene Namecyclin H;1
Annotated Gene Symbol(s)CYCH;1
Annotation TypeOrtholog
Chromosome Positionchr5:9771762-9774684 | Forward length=336
E-Value4.1E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.208057748861
Replicate 215.381010770079
Replicate 318.844787034044
Condition 2: 8 Hour
Replicate 115.303665592028
Replicate 218.135715214217
Replicate 319.576300988848
Condition 3: 24 Hour
Replicate 122.757593792579
Replicate 219.81126452671
Replicate 319.851639134628


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18039.p1 GENE.R_Transcript_18039~~R_Transcript_18039.p1 ORF type:complete len:344 (+),score=79.49,Cyclin_C_2|PF16899.1|2.5e+02,Cyclin_C_2|PF16899.1|5.2e-18,Cyclin_N|PF00134.19|6.2e-14,TFIIB|PF00382.15|3.5e-06 R_Transcript_18039:177-1208(+)
ATGGCGGATTTTCAAACATCAACTCACAGAGCCAAGTGGATTTTCACCCAACAAGAGCTGATTGAGAAATACAAAGCTGCCAATCAAAGAGCCATACATTCCCTAGAGAAGTATGGCACAACACGTTTGGAGATTGATGCTGATGGGTCCTTCTCATATCCTAAAAACCTAAAGGAATTGGAGAATGGTGATAAACAGTCTCGGTCTCGGCCTCTTAAAGTTGAAGAAGAAATGGTTCTACGTGTATTTTACGAGTATAAGATTCAAGTAGTCTGTGGAGCCTTTAAATTCCCACATAAAATTCAGGCTACTGCACTCACATATTACAAAAGGTTTTATCTCTGCTGGTCAGTCATGGAGCACCACCCTAAAACTGTAATGCTAACATGTATATATCTAGCTTGTAAGATAGAGGAAAATCATGTGTCAGCTGAGGAGCTTGGTAAGGGTATCCAGCAGGATCATCGAATGATTCTAGATAACGAGATGCTAGTCCTTCAGAGCTTAGGATTTGATCTCATTATCTATACACCATATCGTTCAATTGATGGATTTATTGATGACATGGAGGATTTTTTCCATACAACAAATGGCCAGATGGACAAGTTGAAGGAGTTACAACAAGCAGCAATCTTCGAGGCAGACAAGGCGATGCTTACTGATGCACCACTACTGTTTCCTCCTGGCCAGCTGGCATTAGCTGTTCTTGGTAGGGCGAACGATGAGCTCAAAGTTCTTGATTTTGAGAGATACCTTGGAAGCATTCTTTCACGCCAACAATCTGTGCACTCCATTTCAGAACTGAAACAGGCTTTCACTGCGACAGATCTTTTGATAAAAAGAGTCAAAATTGGTGATGATGAGGAGATGAAACGTATTGCTAAGAAGTTGAAATCTTGTCAGGATGTTGGTTCTCGTGACGATAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAAACGAAATCCACATGAAATGCAAACTACACCTGGAGCTGCTGCCGAGCTTGCTTTGGATATAAATGGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18039.p1 GENE.R_Transcript_18039~~R_Transcript_18039.p1 ORF type:complete len:344 (+),score=79.49,Cyclin_C_2|PF16899.1|2.5e+02,Cyclin_C_2|PF16899.1|5.2e-18,Cyclin_N|PF00134.19|6.2e-14,TFIIB|PF00382.15|3.5e-06 R_Transcript_18039:177-1208(+)
MADFQTSTHRAKWIFTQQELIEKYKAANQRAIHSLEKYGTTRLEIDADGSFSYPKNLKELENGDKQSRSRPLKVEEEMVLRVFYEYKIQVVCGAFKFPHKIQATALTYYKRFYLCWSVMEHHPKTVMLTCIYLACKIEENHVSAEELGKGIQQDHRMILDNEMLVLQSLGFDLIIYTPYRSIDGFIDDMEDFFHTTNGQMDKLKELQQAAIFEADKAMLTDAPLLFPPGQLALAVLGRANDELKVLDFERYLGSILSRQQSVHSISELKQAFTATDLLIKRVKIGDDEEMKRIAKKLKSCQDVGSRDDKKREKKSKHKSKRNPHEMQTTPGAAAELALDINGR*

Click here to download the sequence:
Link to NCBI Protein BLAST