Transcript Information: R_Transcript_180527.p1


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value7E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40263884458938
Replicate 22.3157684282682
Replicate 30.84215947044678
Condition 2: 8 Hour
Replicate 11.800431246121
Replicate 23.1239467278127
Replicate 31.334677251499
Condition 3: 24 Hour
Replicate 11.3504592486885
Replicate 20.81085510627122
Replicate 30.96563403030429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180527.p1 GENE.R_Transcript_180527~~R_Transcript_180527.p1 ORF type:3prime_partial len:136 (+),score=16.42 R_Transcript_180527:311-715(+)
ATGAAGGAAAGTGTTGAGCATCTTTTCTTCACTTGTGTGTTCTCTAAGGAAGTCATTGAAGGTATAGCTACATGGTTAGGGACTCACAGAGTGTCATATGATAATATGGAATGGCTTGATTGGCTGAGAAGGCTCAGAGGATCACCAGAAAGAATGAAACTAATATGTGCTGTCTATGCTGCTACTGCCTATCAGATTTGGATTACTAGAAACATGATAATCTTCAACCATGAGACTGTTACTCCTGCTCAAGTGGTGACAGAAATTGAGAAGCTAGCTCGACTAAGATTATCTTTGTTGCTATGTTGCACCAGTACGGAAACGGAAACGGGAGCTGGTACGGAAATGGGGACGGGGAAACGGCAAATCCCGAAAAATCAAGAAACGGGTACGGCGAGCAAACGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180527.p1 GENE.R_Transcript_180527~~R_Transcript_180527.p1 ORF type:3prime_partial len:136 (+),score=16.42 R_Transcript_180527:311-715(+)
MKESVEHLFFTCVFSKEVIEGIATWLGTHRVSYDNMEWLDWLRRLRGSPERMKLICAVYAATAYQIWITRNMIIFNHETVTPAQVVTEIEKLARLRLSLLLCCTSTETETGAGTEMGTGKRQIPKNQETGTASKR

Click here to download the sequence:
Link to NCBI Protein BLAST