Transcript Information: R_Transcript_18054.p2


Annotated TAIR IDAT1G04080.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)PRP39
Annotation TypeHomolog
Chromosome Positionchr1:1051803-1056550 | Forward length=823
E-Value4E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.381014794614
Replicate 222.65540862358
Replicate 321.65841402143
Condition 2: 8 Hour
Replicate 125.419930640056
Replicate 230.525345510719
Replicate 326.955389068422
Condition 3: 24 Hour
Replicate 133.091771181078
Replicate 230.76918951492
Replicate 328.269133573813


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18054.p2 GENE.R_Transcript_18054~~R_Transcript_18054.p2 ORF type:complete len:367 (+),score=98.87 R_Transcript_18054:2148-3248(+)
ATGGAAGCAAGTGGGAGCAGTGAACTTGCTGAAAATGCTCTTGCGCGTGCTACCCGAGTATTTGTAAAGAGGCAACCTGAGATCCACCTTTTTGCTGCTCGCTACAAAGAGCAGCATGAAGATATTTCTGGAGCTCGTGCTGCTTATCAGCTTGTACATACTGAGATTTCTCCTGGGCTTCTTGAGGCTATCATTGATCATGCAAATATGGAAAGGCGGCTGGGAAGCGTGGAAGATGCTTTCTCTTTATATGAACAAGCTATTGCCATAGAAAAAGGGAAAGAGCAATCACAGACACTACCAATGCTGTTTGCCCAATATTCTCGGTTTGTATACCTGGCCTGTGGAAATGCAGAAAAGGCTCGTGATATTCTTGTTGGAGCGCTTGAGCATGTCCAGCTTTCAAAGCCTCTTCTGGAGGCTCTAATTCATCTAGAATCTATCCAATCCCTTCCTAAGCGAATTGAGTATATAGATTCTTTAATTGAGAAGTTCATTAATCTGGAGGCTGATAATTCTGATGCTGCCAGTATTCTTGATAGAGAAGAATTATCAAGCATCTATTTGGAGTTTTTGGGCCTTTTTGGTGATGTGCAATCAATAAAGAAGGCTAAGGATCGGCATGCTAGACTGTTCTTGCGTCACAAGAGTGCATCTGAGTCGAGAAAGAGAAATGCGGATGATTGTTTGTCTTCAGACAAGGCAAAGCTTGCAAAATCTTACTCTGCTGTTCCATCAACTGCTTCATCAGCAATTGGAACATATCCCACTGCACAAAATCAATGGGCAGCTGGCTATGGGTCACAGCCTCAAACTTGGCCCCAAGCCACCCAAGCCCAAGCACAGCCATATAATGCTGGCTATACCCAACAGGCTGCATATGGTGGATATTATGGTGCCACTTACCCCCCTCAGCAAGTGCCTGCATCAGTACCTCAAACGCCTGCTTATGCTGCTTACCCCTCAACATACCCTGCGCAGGCTTACCCGCAACAAAATTACGTAGCACCAGTGGCTGCAGCTGTAGCTCCAGCTCTAGCTCCAGCACCAGCAACGCAACCTGCTGCTGCCCCTCAAGCATATTACAGTGGCTACTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18054.p2 GENE.R_Transcript_18054~~R_Transcript_18054.p2 ORF type:complete len:367 (+),score=98.87 R_Transcript_18054:2148-3248(+)
MEASGSSELAENALARATRVFVKRQPEIHLFAARYKEQHEDISGARAAYQLVHTEISPGLLEAIIDHANMERRLGSVEDAFSLYEQAIAIEKGKEQSQTLPMLFAQYSRFVYLACGNAEKARDILVGALEHVQLSKPLLEALIHLESIQSLPKRIEYIDSLIEKFINLEADNSDAASILDREELSSIYLEFLGLFGDVQSIKKAKDRHARLFLRHKSASESRKRNADDCLSSDKAKLAKSYSAVPSTASSAIGTYPTAQNQWAAGYGSQPQTWPQATQAQAQPYNAGYTQQAAYGGYYGATYPPQQVPASVPQTPAYAAYPSTYPAQAYPQQNYVAPVAAAVAPALAPAPATQPAAAPQAYYSGYY*

Click here to download the sequence:
Link to NCBI Protein BLAST