Transcript Information: R_Transcript_180938.p1


Annotated TAIR IDAT1G04880.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1376106-1378264 | Reverse length=448
E-Value1.9E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4934240781134
Replicate 20.57262637498995
Replicate 30.41648613811186
Condition 2: 8 Hour
Replicate 10
Replicate 20.81312297604311
Replicate 30.49504392601055
Condition 3: 24 Hour
Replicate 10.20870733843367
Replicate 20.40100470710141
Replicate 30.19897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_180938.p1 GENE.R_Transcript_180938~~R_Transcript_180938.p1 ORF type:complete len:110 (+),score=11.31 R_Transcript_180938:115-444(+)
ATGAGTGTGCTCAATGATATCCAGGCCATGTTTCCTAGTAATATCCAGACAGAAGATGATGGCGACCCTTGTAATCCAACACACTGGGAATGGGCTGCCTGCAGTTCATCTGCTTCACCACGAATTACTGAAATAGAAAAGACATGGAAAGATGCTACAGCCACTTTCAACTTTCCATCCACAGCGACAAATGCCTCATTTGTGTTGCGCAAGTACTATTATTCACTGCTCCAGCATTATGAGCATCTACTACTTCAAAGCCCAGGCTTGGAATCCATCTACTGTTTACAACATTGGAATCACACATTCAACAAAGTCGTAGACGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_180938.p1 GENE.R_Transcript_180938~~R_Transcript_180938.p1 ORF type:complete len:110 (+),score=11.31 R_Transcript_180938:115-444(+)
MSVLNDIQAMFPSNIQTEDDGDPCNPTHWEWAACSSSASPRITEIEKTWKDATATFNFPSTATNASFVLRKYYYSLLQHYEHLLLQSPGLESIYCLQHWNHTFNKVVDG*

Click here to download the sequence:
Link to NCBI Protein BLAST