Transcript Information: R_Transcript_181079.p1


Annotated TAIR IDAT3G07490.1
Annotated Gene NameARF-GAP domain 11
Annotated Gene Symbol(s)AGD11
Annotation TypeOrtholog
Chromosome Positionchr3:2391189-2391650 | Forward length=153
E-Value1.8E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.578377380891
Replicate 29.1497639428822
Replicate 311.138138464184
Condition 2: 8 Hour
Replicate 15.6160240704691
Replicate 26.8723811163277
Replicate 311.740261915021
Condition 3: 24 Hour
Replicate 112.742636121799
Replicate 29.6112366724993
Replicate 317.369600508409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181079.p1 GENE.R_Transcript_181079~~R_Transcript_181079.p1 ORF type:complete len:218 (+),score=28.22,EF-hand_1|PF00036.28|5.6e-07,EF-hand_1|PF00036.28|0.00017,EF-hand_1|PF00036.28|5.7e-09,EF-hand_1|PF00036.28|2.2e-07,EF-hand_6|PF13405.2|2.2e-06,EF-hand_6|PF13405.2|0.0034,EF-hand_6|PF13405.2|6.8e-09,EF-hand_6|PF13405.2|0.00078,EF-hand_5|PF13202.2|3.3e-06,EF-hand_5|PF13202.2|0.0056,EF-hand_5|PF13202.2|1.2e-08,EF-hand_5|PF13202.2|3.2e-05,EF-hand_7|PF13499.2|1.4e-13,EF-hand_7|PF13499.2|7.5e-12,EF-hand_8|PF13833.2|0.22,EF-hand_8|PF13833.2|1e-06,EF-hand_8|PF13833.2|0.00048,EF-hand_8|PF13833.2|8.3e-11,EF-hand_4|PF12763.3|0.021,EF-hand_4|PF12763.3|0.23,SPARC_Ca_bdg|PF10591.5|2.3,SPARC_Ca_bdg|PF10591.5|14,SPARC_Ca_bdg|PF10591.5|0.018,EF-hand_9|PF14658.2|0.049,EF-hand_9|PF14658.2|0.47 R_Transcript_181079:141-794(+)
ATGCCAACCATTTCCCTTTCTTTCCCTTCCCTTCTTAATTCCCCTCTCTCCTCCTACTTCCTCCCTACCACTACCACTACCACTACCACTAACCCCAACAACAACAACGATTCCGCCACCGCTGCCGCCGCCGCTACAACCACCTCGTCGCCACCGCCACCGACGCCAACGAAGACCAAAATGGAGGCGGTGGAGCTCCGTCGAATCTTCGAGATGTTCGACGTAAACGGCGACGGGAGGATAAGCAAGGGAGAGCTAACGGAGTCTCTCCGGAACATGGGCATATTCATCCCGGATTCGGATCTAACCCATATGATAGCCCGAATCGACGCCAACGGTGACGGGTGTGTGGATGGAGAGGAGTTTCAAGCGCTCTACCGCCTCATCATGGAGGAGAGAGAAGGCGATGCCGAAGCCCTCGACGACGAGGAAGACATAAGAGAAGCGTTCAACGTATTTGACAAAAATGGCGATGGGTTTATCTCCGTCGACGAGCTCCGGTCCGTGCTAGGCTCGCTTGGACTTAGCCAGGGCCGGAGCTTGGAAGATTGTAAACTCATGATCATGAAAGTTGATGTAGATGGTGATGGAAGAGTTAGCTTTACCGAGTTTAAGAAGATGATGAAGGAAGGTGGTTTTGCTGCTTTGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181079.p1 GENE.R_Transcript_181079~~R_Transcript_181079.p1 ORF type:complete len:218 (+),score=28.22,EF-hand_1|PF00036.28|5.6e-07,EF-hand_1|PF00036.28|0.00017,EF-hand_1|PF00036.28|5.7e-09,EF-hand_1|PF00036.28|2.2e-07,EF-hand_6|PF13405.2|2.2e-06,EF-hand_6|PF13405.2|0.0034,EF-hand_6|PF13405.2|6.8e-09,EF-hand_6|PF13405.2|0.00078,EF-hand_5|PF13202.2|3.3e-06,EF-hand_5|PF13202.2|0.0056,EF-hand_5|PF13202.2|1.2e-08,EF-hand_5|PF13202.2|3.2e-05,EF-hand_7|PF13499.2|1.4e-13,EF-hand_7|PF13499.2|7.5e-12,EF-hand_8|PF13833.2|0.22,EF-hand_8|PF13833.2|1e-06,EF-hand_8|PF13833.2|0.00048,EF-hand_8|PF13833.2|8.3e-11,EF-hand_4|PF12763.3|0.021,EF-hand_4|PF12763.3|0.23,SPARC_Ca_bdg|PF10591.5|2.3,SPARC_Ca_bdg|PF10591.5|14,SPARC_Ca_bdg|PF10591.5|0.018,EF-hand_9|PF14658.2|0.049,EF-hand_9|PF14658.2|0.47 R_Transcript_181079:141-794(+)
MPTISLSFPSLLNSPLSSYFLPTTTTTTTTNPNNNNDSATAAAAATTTSSPPPPTPTKTKMEAVELRRIFEMFDVNGDGRISKGELTESLRNMGIFIPDSDLTHMIARIDANGDGCVDGEEFQALYRLIMEEREGDAEALDDEEDIREAFNVFDKNGDGFISVDELRSVLGSLGLSQGRSLEDCKLMIMKVDVDGDGRVSFTEFKKMMKEGGFAALN*

Click here to download the sequence:
Link to NCBI Protein BLAST