Transcript Information: R_Transcript_181197.p1


Annotated TAIR IDAT5G51510.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20921512-20922818 | Forward length=170
E-Value2.1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.101688964993
Replicate 214.806639599933
Replicate 316.551110979879
Condition 2: 8 Hour
Replicate 114.578289535065
Replicate 220.422077057268
Replicate 318.886068853582
Condition 3: 24 Hour
Replicate 122.55969496364
Replicate 219.378030932762
Replicate 330.237927284211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181197.p1 GENE.R_Transcript_181197~~R_Transcript_181197.p1 ORF type:complete len:173 (+),score=32.10,Jagunal|PF07086.8|5.7e-07 R_Transcript_181197:376-894(+)
ATGCAGCAGAGAAGATCAGGTAGACCGTCTGGAACTGACGGTTCCGATTTTTCGTATCGCATGGTCGTCGATTCCAGGTACACTAGAGTTGCTAAGGGGAAGTCTCTCCTTTCTCGTCTTCTCCTCATTCAGGGGCTCGTTGTATTAGCTGGTGCTGTTCTAGTTCTGGTACCATTTGCTAAGGGCGAAGATCCTAATGTGCTTGCCCTTTCATCCGTTGCTTCCAGTTTTCTTTCTCTTATCATTGGTGAATCAGGTCGAAGGTATAGCCGAAGTACTTTTTTGAAGATTTTCTTGATCTTGTCATTTGCTGGAACTCTTCTTTTGATTGCTTATGCATTGAAGAAGAATGTCCTATTGGAGGTGTTCGAGACTGGACTGGCAAACAGCTGGGAGAAACAAAGAATACAACTCTTTGAGGCTGTTAATGTTTTTCTTGGGGTGTTGGTGCAGGTTTTTACTACAAGTACCACTTTATCTCTAATTGATAACATGTCTCCTCCAAAGCGATCATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181197.p1 GENE.R_Transcript_181197~~R_Transcript_181197.p1 ORF type:complete len:173 (+),score=32.10,Jagunal|PF07086.8|5.7e-07 R_Transcript_181197:376-894(+)
MQQRRSGRPSGTDGSDFSYRMVVDSRYTRVAKGKSLLSRLLLIQGLVVLAGAVLVLVPFAKGEDPNVLALSSVASSFLSLIIGESGRRYSRSTFLKIFLILSFAGTLLLIAYALKKNVLLEVFETGLANSWEKQRIQLFEAVNVFLGVLVQVFTTSTTLSLIDNMSPPKRSS*

Click here to download the sequence:
Link to NCBI Protein BLAST