Transcript Information: R_Transcript_181199.p1


Annotated TAIR IDAT5G51510.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20921512-20922818 | Forward length=170
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9714122484426
Replicate 21.139334131117
Replicate 32.486002529815
Condition 2: 8 Hour
Replicate 16.0740130101693
Replicate 22.0800820317382
Replicate 32.8142031969592
Condition 3: 24 Hour
Replicate 11.2457724852242
Replicate 21.3677679932141
Replicate 32.5450819403369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181199.p1 GENE.R_Transcript_181199~~R_Transcript_181199.p1 ORF type:complete len:129 (+),score=12.28,Jagunal|PF07086.8|3.1e-07 R_Transcript_181199:378-764(+)
ATGCAGCAGAGAAGATCAGGTAGACCGTCTGGAACTGACGGTTCCGATTTTTCGTATCGCATGGTCGTCGATTCCAGGTACACTAGAGTTGCTAAGGGGAAGTCTCTCCTTTCTCGTCTTCTCCTCATTCAGGGGCTCGTTGTATTAGCTGGTGCTGTTCTAGTTCTGGTACCATTTGCTAAGGGCGAAGATCCTAATGTGCTTGCCCTTTCATCCGTTGCTTCCAGTTTTCTTTCTCTTATCATTGGTGAATCAGGTTGTATTCATGTCTCTTTTTGTGCATGGATTTGTGTCTTTGTTACTTTGTTATGGTCCATCACGGTATGCCCCGCCACTTGCATATCTTTTCTTATTGTTCGTTTGATGTTTTCAAGGTCGAAGGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181199.p1 GENE.R_Transcript_181199~~R_Transcript_181199.p1 ORF type:complete len:129 (+),score=12.28,Jagunal|PF07086.8|3.1e-07 R_Transcript_181199:378-764(+)
MQQRRSGRPSGTDGSDFSYRMVVDSRYTRVAKGKSLLSRLLLIQGLVVLAGAVLVLVPFAKGEDPNVLALSSVASSFLSLIIGESGCIHVSFCAWICVFVTLLWSITVCPATCISFLIVRLMFSRSKV*

Click here to download the sequence:
Link to NCBI Protein BLAST