Transcript Information: R_Transcript_181205.p1


Annotated TAIR IDAT5G51510.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20921512-20922818 | Forward length=170
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.173261986372
Replicate 230.708874758531
Replicate 328.360722738094
Condition 2: 8 Hour
Replicate 119.988461181425
Replicate 220.383388889244
Replicate 321.732540606722
Condition 3: 24 Hour
Replicate 121.708402752727
Replicate 221.905223115811
Replicate 327.099062945682


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181205.p1 GENE.R_Transcript_181205~~R_Transcript_181205.p1 ORF type:5prime_partial len:147 (+),score=29.57 R_Transcript_181205:1-441(+)
ATTCCAGGTACACTAGAGTTGCCATGGGGAAGTCTCTCCTTTCTCGTCATTCAGGGGCTCGTTGTATTAGCTGGTGCTGTTCTAGTTCTGGTACCATTTGCTAAGGGCGAAGATCCTAATGTGCTTGCCCTTTCATCCGTTGCTTCCAGTTTTCTTTCTCTTATCATTGGTGAATCAGGTCGAAGGTATAGCCGAAGTACTTTTTTGAAGATCTACTTGATCTTGTCATTTGTTGGAACTCTTCTTTTGATTGCTTGTGCGTTGAAGAAGAATGTTCTACTGGAGGTGTTTGAGGCTGGACTGGTAAACAGCTGGGAGAAACAAAGAATACAACTCTTTGAGGCTGTTAATGTTTTTCTTGGGGTGTTGGTGCAGGTTTTTACTACAAGTACCACTTTATCTCTAATTGATAACATGTCTCCTCCAAAGCGATCATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181205.p1 GENE.R_Transcript_181205~~R_Transcript_181205.p1 ORF type:5prime_partial len:147 (+),score=29.57 R_Transcript_181205:1-441(+)
IPGTLELPWGSLSFLVIQGLVVLAGAVLVLVPFAKGEDPNVLALSSVASSFLSLIIGESGRRYSRSTFLKIYLILSFVGTLLLIACALKKNVLLEVFEAGLVNSWEKQRIQLFEAVNVFLGVLVQVFTTSTTLSLIDNMSPPKRSS*

Click here to download the sequence:
Link to NCBI Protein BLAST