Transcript Information: R_Transcript_181406.p1


Annotated TAIR IDAT5G08320.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2677153-2678603 | Forward length=150
E-Value2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6530466503952
Replicate 21.2207151404824
Replicate 32.6635741390875
Condition 2: 8 Hour
Replicate 12.704833918591
Replicate 22.6001025396727
Replicate 34.2213047954388
Condition 3: 24 Hour
Replicate 13.8707930790896
Replicate 22.179880239185
Replicate 34.9629097836569


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181406.p1 GENE.R_Transcript_181406~~R_Transcript_181406.p1 ORF type:complete len:172 (+),score=42.67,Eapp_C|PF10238.5|5.2e-48 R_Transcript_181406:91-606(+)
ATGGGAGGGCCAAAAGTGAGCGAGAGTGTAGAATCGCCAACCAATTCCCAGCAAACAGTTTCTGATGATGATGAGATAGATTACTCCACGAAACCGGAGTTTTATGATTCGGACCTTGATGATAAGGATGAGTCATGGGTGGCAAGCAAGAGGAAAGGCCGGTACACTGATGCCGTGCTCAGCTGCCCTGCTTGTTTCACCACTCTTTGCCTCGAGTGTCAGAGGCATGAGATATATTTGACGCAGTACAGGGCCATGTTTGTTGTTAATTGTGAAATCAAGGATAAAAAGGTTTTTCCACAAGGAAGTCAGAAGCGAAGGAGGAACAGGAAGAGAGCAGCGGGGCAAGCTGAAGGAAGTTCACAGAGTGGTGAAGCAGTCAGGGAAGCTGAAGGCGGTTCACAGAGTGGTGGAGCAGTCAGGCAAGTCTGCTGCTCAGTTTGTTCCACAGAGGTTGGAGTTATTGACGAGGATGAAGTTTATCATTTTTATGATGTCCTTCCAAGTGAGTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181406.p1 GENE.R_Transcript_181406~~R_Transcript_181406.p1 ORF type:complete len:172 (+),score=42.67,Eapp_C|PF10238.5|5.2e-48 R_Transcript_181406:91-606(+)
MGGPKVSESVESPTNSQQTVSDDDEIDYSTKPEFYDSDLDDKDESWVASKRKGRYTDAVLSCPACFTTLCLECQRHEIYLTQYRAMFVVNCEIKDKKVFPQGSQKRRRNRKRAAGQAEGSSQSGEAVREAEGGSQSGGAVRQVCCSVCSTEVGVIDEDEVYHFYDVLPSES*

Click here to download the sequence:
Link to NCBI Protein BLAST