Transcript Information: R_Transcript_181410.p2


Annotated TAIR IDAT5G08320.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2677153-2678603 | Forward length=150
E-Value2.6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31470622335722
Replicate 20.18100258979567
Replicate 30.7898875033156
Condition 2: 8 Hour
Replicate 10.84434017059466
Replicate 20
Replicate 31.2518352151991
Condition 3: 24 Hour
Replicate 10.59373639381993
Replicate 20.3802630843203
Replicate 30.18868710936981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181410.p2 GENE.R_Transcript_181410~~R_Transcript_181410.p2 ORF type:complete len:116 (+),score=6.85,Eapp_C|PF10238.5|3.8e-15 R_Transcript_181410:91-438(+)
ATGGGAGGGCCAAAAGTGAGCGAGAGTGTAGAATCGCCAACCAATTCCCAGCAAACAGTTTCTGATGATGATGAGATAGATTACTCCACGAAACCGGAGTTTTATGATTCGGACCTTGATGATAAGGATGAGTCATGGGTGGCAAGCAAGAGGAAAGGCCGGTACACTGATGCCGTGCTCAGCTGCCCTGCTTGTTTCACCACTCTTTGCCTCGAGTGTCAGAGGTATTCTTTTACTTCTTGTAACATGAATTTCGGTTTTTGGGCAGTTCAGTGCGAGGCGAATAGTGAATTATTAAGACCAATAACTCAAAATATAGGTTGGATTTTCGATATAGAACCGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181410.p2 GENE.R_Transcript_181410~~R_Transcript_181410.p2 ORF type:complete len:116 (+),score=6.85,Eapp_C|PF10238.5|3.8e-15 R_Transcript_181410:91-438(+)
MGGPKVSESVESPTNSQQTVSDDDEIDYSTKPEFYDSDLDDKDESWVASKRKGRYTDAVLSCPACFTTLCLECQRYSFTSCNMNFGFWAVQCEANSELLRPITQNIGWIFDIEPF*

Click here to download the sequence:
Link to NCBI Protein BLAST