Transcript Information: R_Transcript_181411.p1


Annotated TAIR IDAT5G08320.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2677153-2678603 | Forward length=150
E-Value7.2E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3291564005462
Replicate 22.7730962813979
Replicate 34.4660934935895
Condition 2: 8 Hour
Replicate 13.3879813134553
Replicate 23.3752274477261
Replicate 33.3106711194417
Condition 3: 24 Hour
Replicate 14.0428842916712
Replicate 22.4968217611974
Replicate 32.4778533607808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181411.p1 GENE.R_Transcript_181411~~R_Transcript_181411.p1 ORF type:complete len:159 (+),score=31.86,Eapp_C|PF10238.5|5e-43 R_Transcript_181411:91-567(+)
ATGGGAGGGCCAAAAGTGAGCGAGAGTGTAGAATCGCCAACCAATTCCCAGCAAACAGTTTCTGATGATGATGAGATAGATTACTCCACGAAACCGGAGTTTTATGATTCGGACCTTGATGATAAGGATGAGTCATGGGTGGCAAGCAAGAGGAAAGGCCGGTACACTGATGCCGTGCTCAGCTGCCCTGCTTGTTTCACCACTCTTTGCCTCGAGTGTCAGAGGCATGAGATATATTTGACGCAGTACAGGGCCATGTTTGTTGTTAATTGTGAAATCAAGCATAAAAAGGTTTTTCCACAACGAAGTCAGAAGCGAAAAAGGAACAGGAAGAGAGCAGCGGGGCAAGCTGAAGGAAGTTCACAGAGTGGTGAAGCAGTCAGGCAAGTCTGCTGCTCAGTTTGTTCCACAGAGGTTGGAGTTATTGACGAGGATGAAGTTTATCATTTTTATGATGTCCTTCCAAGTGAGTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181411.p1 GENE.R_Transcript_181411~~R_Transcript_181411.p1 ORF type:complete len:159 (+),score=31.86,Eapp_C|PF10238.5|5e-43 R_Transcript_181411:91-567(+)
MGGPKVSESVESPTNSQQTVSDDDEIDYSTKPEFYDSDLDDKDESWVASKRKGRYTDAVLSCPACFTTLCLECQRHEIYLTQYRAMFVVNCEIKHKKVFPQRSQKRKRNRKRAAGQAEGSSQSGEAVRQVCCSVCSTEVGVIDEDEVYHFYDVLPSES*

Click here to download the sequence:
Link to NCBI Protein BLAST