Transcript Information: R_Transcript_18150.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value5.7E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.452457327709
Replicate 210.283902244717
Replicate 311.954244984581
Condition 2: 8 Hour
Replicate 110.636716842972
Replicate 212.908030917069
Replicate 313.547557780814
Condition 3: 24 Hour
Replicate 112.382490778791
Replicate 210.738274736812
Replicate 313.528260622805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18150.p1 GENE.R_Transcript_18150~~R_Transcript_18150.p1 ORF type:complete len:343 (+),score=81.86,SNAPc_SNAP43|PF09808.5|3.7e-45 R_Transcript_18150:324-1352(+)
ATGGATTTATCAACATTCAAACAAGATATTGATGAGCTTTTGAAAGAGTTCGCTGAGGGGGAGCTTAAAACTGTGGCTGATATGAAAAGAGTATGGCTTGGTCGGAAGTTTTCCTACATATTTGAGGCTCGACCATCAAATAACTTGGCCTTATTTATGCAATCTTTGTACAACCACTCAATCAGCTACCTGGACACCACTAAGTCGTTATCGCATAAATTGGGTGGCCTCTATTGTCTATATTTTCTCTACGAGACGCAACCTTTCAAGCCTCCTTTCAAGATATATCTATCTCTTGGAGATTTACGGAGGCTGAAAGCTTTAGTTGTGAATGCAAAGGAAAATGGAATAAAGGTTGTATCTGTTTTGGTCAAAAGGATGCTGGAAAAGAACACATTCCTCTTCGGTTTTGTCAATATAAATGAGTACTCCGAGAAAGAGAGGATAAAGGAATTGGTAGATGCACAGAATGCCTGCATACAGAAGATGCATGAAAAGTTGTTGGCTAATACTGAGATTGAGCAGTTCCTTCACATGGACATGGGCGTGGAACTTGACCTGAAGGTGCTCCAGAATATGTCTACAGAATATGAGGCAACTAAGAGTCTTGCTGTTAGAGAGGCTAGTCAGTTGGTGGATGTCGAAAATATAAAGCATATAGCAGAAGATAGGCCAACAATTGGAGATGAAGTGCAGAAGATAACTGAGGAATGGAGTAACCAAAAAGACATGTACTCTCAGCAAACGGGATTAAACCAGCGTTCTGTTGTGCCTGTTCCAGAGAGAGGAGACTCTAAAAGAAGGACCGAACAGCAGCTAGGCAATGATGATGAACAGCAAGACGGAGGTTTCTTGAAGCTCTTATTGGGAATTGATTCGCCAGAGGCCAATGGCAATGGTGAACATATTCCGACTGATCAACATTCAGTTCCTCCTGAAGGAGATGACCAGCAAGATGATGAATTTGACTATGCTAAGGAACTGGAAAATCAACTATATGAAGATATACCAAGTGATTGGGACTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18150.p1 GENE.R_Transcript_18150~~R_Transcript_18150.p1 ORF type:complete len:343 (+),score=81.86,SNAPc_SNAP43|PF09808.5|3.7e-45 R_Transcript_18150:324-1352(+)
MDLSTFKQDIDELLKEFAEGELKTVADMKRVWLGRKFSYIFEARPSNNLALFMQSLYNHSISYLDTTKSLSHKLGGLYCLYFLYETQPFKPPFKIYLSLGDLRRLKALVVNAKENGIKVVSVLVKRMLEKNTFLFGFVNINEYSEKERIKELVDAQNACIQKMHEKLLANTEIEQFLHMDMGVELDLKVLQNMSTEYEATKSLAVREASQLVDVENIKHIAEDRPTIGDEVQKITEEWSNQKDMYSQQTGLNQRSVVPVPERGDSKRRTEQQLGNDDEQQDGGFLKLLLGIDSPEANGNGEHIPTDQHSVPPEGDDQQDDEFDYAKELENQLYEDIPSDWDL*

Click here to download the sequence:
Link to NCBI Protein BLAST