Transcript Information: R_Transcript_181544.p1


Annotated TAIR IDAT5G64510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)TIN1
Annotation TypeOrtholog
Chromosome Positionchr5:25784592-25786152 | Forward length=424
E-Value5.3E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3621939349204
Replicate 23.309761641978
Replicate 36.5447821703293
Condition 2: 8 Hour
Replicate 13.7392207554907
Replicate 26.1685191286029
Replicate 37.1086356863092
Condition 3: 24 Hour
Replicate 15.4849933524318
Replicate 23.856954140963
Replicate 37.1161995533755


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181544.p1 GENE.R_Transcript_181544~~R_Transcript_181544.p1 ORF type:3prime_partial len:406 (+),score=113.87 R_Transcript_181544:102-1316(+)
ATGGCTTCCGAAAATTTCAGAGCTTTGATAGCGATTCTTGTTGTATCTATTGTGGTGGTGACATCATCAGCTCTTGTTTCATCTCCTCATGTTAATCCTCCTTTTCCCAAATTCCTTTCTGATGTGAAGGAAGCAATAGTGAAAGGATTAGGGTTTCAGGCGGATGATTTTAAGATATCAGGGTTTGATTGGAGGGATGCATTGGTGGGGCAGTCAGTAGCATATGAATTTGATGTGGAAATTGATAATAAGGTTCTTCCAGTGAAGCTCCTTGAGGATGTGAGTAGATGGGAGTATGTGGATTTGCCTATATTTCGTGTTGAAGAAACTGTCAAGCCAGGGGACAAAAATGGTTTGATTGAGAGGAAGAAATTGCAGAAGAATGCAGGTCCTGTTTTGGCACCCTTTCAGCTTGCTGGTCCTATGGAGCTCTGGATTCAGGATGCCAAAGACATGAGACTTTCATTGCCTCATGATGTGGATGCTGGTGTTCTGAGGAAGGTAATCCTGGGAGAGGGTGCTGTAGTTACAGTCAAGGGTGCGAAATCAGTTAGCTTGAGGCAGCCTCTAGACCTGCCACTACCCCTCAACAGAAGCCACAATGGGATTGCTTCTGGTCTGTTAAATCTAGCAGAGCACCTTCGTCATACTTCTCGTACCAAAGGAGCTCCCCTCCTTTCTCTCCGCATTGTGGGCCCTACTTCCCTGACATCCCCTTCTCCTTCGTCATCCTCATCTCCTAGACGTTTGAAGCTTAAGCGTCTGGCCCCAGGACTTGTGGAGTTATCTTCACCATCAACTAACAAAGTCATCGAACCTGCGACTCCTGTTGATCTTCCTGCAGGGGAAGTACCTACCCTCCTTACACCAAACCAGTTCACAACATTGTGGCCGGTGGAGTCTCTGAATGGCACCAACTTGAACTTGCGTGGTCTGGAAACACTTCTATCTTCTGTATTGGGTCCAAAAGCCAACAAGAAAGGTTCCTTTAGGCTGTTGAAAGCTGATGTATCTGCTCAGACATTCTTGAAGATTGGATTTGGGTTGGAGAAGAAGCTGGAAAAGGGAGACGGATTCAACGTTGAAGACATCCCTGATTGGAGGACAAAGCCCGAGAAAGTGAGGATGCATTTTGAGGTTCTTGCTAAGGTCGAGGGAGACAAAGTTGTGCCAGAAAAAGTTATGCAGGTTCATCCTGTTATTACAGAGGATACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181544.p1 GENE.R_Transcript_181544~~R_Transcript_181544.p1 ORF type:3prime_partial len:406 (+),score=113.87 R_Transcript_181544:102-1316(+)
MASENFRALIAILVVSIVVVTSSALVSSPHVNPPFPKFLSDVKEAIVKGLGFQADDFKISGFDWRDALVGQSVAYEFDVEIDNKVLPVKLLEDVSRWEYVDLPIFRVEETVKPGDKNGLIERKKLQKNAGPVLAPFQLAGPMELWIQDAKDMRLSLPHDVDAGVLRKVILGEGAVVTVKGAKSVSLRQPLDLPLPLNRSHNGIASGLLNLAEHLRHTSRTKGAPLLSLRIVGPTSLTSPSPSSSSSPRRLKLKRLAPGLVELSSPSTNKVIEPATPVDLPAGEVPTLLTPNQFTTLWPVESLNGTNLNLRGLETLLSSVLGPKANKKGSFRLLKADVSAQTFLKIGFGLEKKLEKGDGFNVEDIPDWRTKPEKVRMHFEVLAKVEGDKVVPEKVMQVHPVITEDT

Click here to download the sequence:
Link to NCBI Protein BLAST