Transcript Information: R_Transcript_181549.p1


Annotated TAIR IDAT5G64510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)TIN1
Annotation TypeOrtholog
Chromosome Positionchr5:25784592-25786152 | Forward length=424
E-Value1.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8394867646531
Replicate 27.8736126561118
Replicate 39.126903260967
Condition 2: 8 Hour
Replicate 16.3127620567116
Replicate 211.005746531208
Replicate 39.0758053101935
Condition 3: 24 Hour
Replicate 18.4298198414226
Replicate 28.2707220839665
Replicate 39.4048731076512


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181549.p1 GENE.R_Transcript_181549~~R_Transcript_181549.p1 ORF type:5prime_partial len:128 (-),score=31.36 R_Transcript_181549:37-420(-)
AACTTGAACTTGCGTGGTCTGGAAACACTTCTATCTTCTGTATTGGGTCCAAAAGCCAACAAGAAAGGTTCCTTTAGGCTGCTGAAAGCTGATGTATCTGCTCAGACATTCCTGAAGATAGGATTTGGGTTGGAGAAGAAGCTGGAAAAGGGAGACGGATTCAACGTTGAAGACATCCCTGATTGGAGGACAAAGCCCGAGAAAGTGAGGATGCATTTTGAGGTTCTTGCTAAGGTCGAGGGAGACAAAGTTGTGCCAGAAAAAGTTATGCAAGTTCATCCTGTTATTACAGAGGATACTGTGGCGCCTATTGTGTTAACAGGCAATGTAACTATGTCTAAATTGCCAATAGTCCACCCTCCATCAAACCCTTTCACCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181549.p1 GENE.R_Transcript_181549~~R_Transcript_181549.p1 ORF type:5prime_partial len:128 (-),score=31.36 R_Transcript_181549:37-420(-)
NLNLRGLETLLSSVLGPKANKKGSFRLLKADVSAQTFLKIGFGLEKKLEKGDGFNVEDIPDWRTKPEKVRMHFEVLAKVEGDKVVPEKVMQVHPVITEDTVAPIVLTGNVTMSKLPIVHPPSNPFTL*

Click here to download the sequence:
Link to NCBI Protein BLAST