Transcript Information: R_Transcript_181560.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value9E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4139617640979
Replicate 21.3307514348358
Replicate 30.32263010698806
Condition 2: 8 Hour
Replicate 12.5865350296386
Replicate 21.2597679910527
Replicate 31.7895954132776
Condition 3: 24 Hour
Replicate 10.97004819271989
Replicate 20.93191234748918
Replicate 30.15413876540068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181560.p1 GENE.R_Transcript_181560~~R_Transcript_181560.p1 ORF type:5prime_partial len:142 (+),score=5.04,MS_channel|PF00924.14|1.9e-10 R_Transcript_181560:3-428(+)
GATATCGACCTCCTCACAACTGTGGCTGCTACGTTGGAATATGAGAAGAGGATCTACCCAAATTCGATGTTGTTTGAGTCATCTATCAGCAACTATTCCAGAAGCCAATGTTGTATGGGAGACTCTGTTGTGTTCTATCTCGACATAACTACACCTGAAAGCAAAATAGAGATGCTTGCAAAACAAATACTAAAAAGTCACATTAAGGCGAATCCTCAAGACTGGAAGCGAAAGCACGAGTTAGCTATAGAGTTCCATATGAAGGAGATGGGGAGCATGATAAAGACAACACTACAAGTGAACCACACCATTAACTACCACGACTACGGTGAAAGAGTAGCAAGAAGAACTAAACTTATTTCACATATCAAGAGGTTTCTTGAGGAACTTAATATATTGCATGCACAAGTGAGAACGAAAAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181560.p1 GENE.R_Transcript_181560~~R_Transcript_181560.p1 ORF type:5prime_partial len:142 (+),score=5.04,MS_channel|PF00924.14|1.9e-10 R_Transcript_181560:3-428(+)
DIDLLTTVAATLEYEKRIYPNSMLFESSISNYSRSQCCMGDSVVFYLDITTPESKIEMLAKQILKSHIKANPQDWKRKHELAIEFHMKEMGSMIKTTLQVNHTINYHDYGERVARRTKLISHIKRFLEELNILHAQVRTKN*

Click here to download the sequence:
Link to NCBI Protein BLAST