Transcript Information: R_Transcript_18166.p1


Annotated TAIR IDAT1G50700.1
Annotated Gene Namecalcium-dependent protein kinase 33
Annotated Gene Symbol(s)CPK33
Annotation TypeOrtholog
Chromosome Positionchr1:18782214-18784385 | Forward length=521
E-Value6.1E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.295121113839
Replicate 222.745992117656
Replicate 320.043395396633
Condition 2: 8 Hour
Replicate 118.364398710434
Replicate 218.983456979757
Replicate 319.286086284161
Condition 3: 24 Hour
Replicate 124.033954441503
Replicate 221.480903190302
Replicate 322.001703148808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18166.p1 GENE.R_Transcript_18166~~R_Transcript_18166.p1 ORF type:complete len:192 (+),score=50.83,EF-hand_1|PF00036.28|4.3e-06,EF-hand_1|PF00036.28|2.5e-06,EF-hand_1|PF00036.28|1.6e-07,EF-hand_1|PF00036.28|3.3e-09,EF-hand_7|PF13499.2|1.2e-13,EF-hand_7|PF13499.2|6.2e-12,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|9.3e+02,EF-hand_6|PF13405.2|0.017,EF-hand_6|PF13405.2|2.3e-07,EF-hand_6|PF13405.2|0.00037,EF-hand_5|PF13202.2|8.6e-05,EF-hand_5|PF13202.2|0.0007,EF-hand_5|PF13202.2|0.00021,EF-hand_5|PF13202.2|0.00084,EF-hand_8|PF13833.2|0.0086,EF-hand_8|PF13833.2|7.6e-08,EF-hand_8|PF13833.2|28,EF-hand_8|PF13833.2|6.3e-10,EF-hand_4|PF12763.3|1.1e+03,EF-hand_4|PF12763.3|0.0012,EF-hand_4|PF12763.3|0.0015,SPARC_Ca_bdg|PF10591.5|0.0056,SPARC_Ca_bdg|PF10591.5|0.00044,EF-hand_9|PF14658.2|0.0069,EF-hand_9|PF14658.2|0.014 R_Transcript_18166:351-926(+)
ATGAGAGAGGGTGGAAATGCATCAGACAGGCCAATTGATAGTGCTGTGCTCTCTAGAATGAAACAGTTCAGGGCAATGAACAAGCTGAAGAAGCTTGCTCTGAAGGTCATTGCAGACAATATGTCTGAAGAGGAAATAAAGGGTCTCAAAGCCATGTTTATTAACATGGACACAGACAAGAGTGGCTCAATCACTTATGAAGAGCTAAAAAGAGGATTGGCTGAGCTCGGTTCAAAGCTTACCGAGGCCGAAGTCAAGCAACTTATGGAAGCTGCTGATGTGGATGGAAATGGAACCATTGATTACAGTGAATTTATCACTGCAACTATGAATAGACATAGACTGGAAACCGATGAAAATCTTTTGAAAGCATTCCAACATTTTGACAAGGATAATAGTGGGTTTATAACAACAGATGAACTGGAAATTGCCATGAAGGAATATGGAATCGGTGATGAAAGCAGCATCAAGGAAATTCTCTCTGAAGTTGATACCGATAATGATGGACGAATCAACTATGACGAATTTTGCACAATGATGAGAAGCGGTACAAAGCAACAAGTAAAACTCTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18166.p1 GENE.R_Transcript_18166~~R_Transcript_18166.p1 ORF type:complete len:192 (+),score=50.83,EF-hand_1|PF00036.28|4.3e-06,EF-hand_1|PF00036.28|2.5e-06,EF-hand_1|PF00036.28|1.6e-07,EF-hand_1|PF00036.28|3.3e-09,EF-hand_7|PF13499.2|1.2e-13,EF-hand_7|PF13499.2|6.2e-12,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|9.3e+02,EF-hand_6|PF13405.2|0.017,EF-hand_6|PF13405.2|2.3e-07,EF-hand_6|PF13405.2|0.00037,EF-hand_5|PF13202.2|8.6e-05,EF-hand_5|PF13202.2|0.0007,EF-hand_5|PF13202.2|0.00021,EF-hand_5|PF13202.2|0.00084,EF-hand_8|PF13833.2|0.0086,EF-hand_8|PF13833.2|7.6e-08,EF-hand_8|PF13833.2|28,EF-hand_8|PF13833.2|6.3e-10,EF-hand_4|PF12763.3|1.1e+03,EF-hand_4|PF12763.3|0.0012,EF-hand_4|PF12763.3|0.0015,SPARC_Ca_bdg|PF10591.5|0.0056,SPARC_Ca_bdg|PF10591.5|0.00044,EF-hand_9|PF14658.2|0.0069,EF-hand_9|PF14658.2|0.014 R_Transcript_18166:351-926(+)
MREGGNASDRPIDSAVLSRMKQFRAMNKLKKLALKVIADNMSEEEIKGLKAMFINMDTDKSGSITYEELKRGLAELGSKLTEAEVKQLMEAADVDGNGTIDYSEFITATMNRHRLETDENLLKAFQHFDKDNSGFITTDELEIAMKEYGIGDESSIKEILSEVDTDNDGRINYDEFCTMMRSGTKQQVKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST