Transcript Information: R_Transcript_181810.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91838797256447
Replicate 21.1884698348848
Replicate 31.584742852564
Condition 2: 8 Hour
Replicate 10.30799830122321
Replicate 20.98444133892012
Replicate 31.141610730842
Condition 3: 24 Hour
Replicate 10.86633234821525
Replicate 20.97098624046567
Replicate 30.6882926002169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181810.p1 GENE.R_Transcript_181810~~R_Transcript_181810.p1 ORF type:complete len:159 (+),score=15.50,zf-RVT|PF13966.2|1.6e-11 R_Transcript_181810:1336-1812(+)
ATGGCCTTCCAACATCGTTTGAAAACCAAAGCTTTGTTGAAAGCTAGAGGCATTATCAATAACGATACCTGTGGGTTTTGCCAGCGACATCTAGAGACATGTAAACATCTTTTCTTTGAATGTGATCTGTCAAGGGGTCTTTGGAGGGCTGGTATTCATTGGGTCAGAATCTTCAGGCAACCATTGAGTCTTGTCCATGAAATCAAGCGGTTTCCTAGTAGGAAGAGGAGGAAATCTATCCCATATCACATTCATTGGGCTTCTCTTGTCACAACAATAGCTGAGATATGGCATGAAAGGAACCTTAATTGTTTCCAGCAAAAGACCACTGGATATCATTTTTCGACAGATTCAGTTGACTGTATGCATTATAGCTTTTGCACAGTTTGGTCAGAAAGCTTATTCTGTTCTCCTTATGTTAGGATAATTTATCTTGGTGCTTTTGCTGTTTGTTTCACAATGTCATGGTGGCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181810.p1 GENE.R_Transcript_181810~~R_Transcript_181810.p1 ORF type:complete len:159 (+),score=15.50,zf-RVT|PF13966.2|1.6e-11 R_Transcript_181810:1336-1812(+)
MAFQHRLKTKALLKARGIINNDTCGFCQRHLETCKHLFFECDLSRGLWRAGIHWVRIFRQPLSLVHEIKRFPSRKRRKSIPYHIHWASLVTTIAEIWHERNLNCFQQKTTGYHFSTDSVDCMHYSFCTVWSESLFCSPYVRIIYLGAFAVCFTMSWWL*

Click here to download the sequence:
Link to NCBI Protein BLAST