Transcript Information: R_Transcript_181891.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59601505158265
Replicate 20.25709755611793
Replicate 30.93496888147561
Condition 2: 8 Hour
Replicate 10.19988461181425
Replicate 20.73015124379382
Replicate 30.44452923968295
Condition 3: 24 Hour
Replicate 10.56223201373969
Replicate 20.4501073242975
Replicate 30.98271327165661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181891.p2 GENE.R_Transcript_181891~~R_Transcript_181891.p2 ORF type:complete len:245 (+),score=37.14,RVT_1|PF00078.23|3.3e-38 R_Transcript_181891:2694-3428(+)
ATGTACTGTACAGTGTTATCCAAGTTGTTGACTGAGAAACTTAAACTGGTAGTGGAGGGGCTGGTGGGACAGGAACAAGCAGCTTTCATAGCTAGAAGATCAATTCATAATAATATCTTATCATCTCACAATTTGGTTCATTCCTATGGTAGAAAGCATATTTTACCTAGGGCTATGGTAAAGATTGATATCAAGAAAGCCTATGATAGTGTCTCTTGGAAGTTCATTAAGGCTATGCTATCATATTATGAGTTCCCGGGAATTTTTTTGGATAGGGTGATGACTTGCTTATCTACAACTCAGTTTTCTGTCAATATAAATGGAGAGTTGAAAGGGTTCTTCAAGGGGGAAGGTGGATTAAGGCAAGGTGACCCCATGTCCCCTTACCTGTTTGTTCTGTGTATGGAAATTCTTTCGAGGATGCTAAGGAATGGTTTTAGGAATCCAGATTTGAAACCTCACCCTAAATGCTCCAGGATGAAGCTCAACCACCTTATCTTTGCGGATGAATTGCTGCTTTTCACCAAAGGAGAGAAAAAATCAATCATAAGTATGCTTGCCATAATAAATGACTTCTCTGGAATCTCAGGCCTCTGTGCTAATGAAACCAAAAGCTTCATCTACTTTGGGGGGCTTAGCCAAGAGGAGAAGGGAGATATGCTGGCCTGTACAGGGTATTCTGAGGGATCTCTTCCTTTTAGATACCTTGGAGTTCCTTGTCAGCCACTAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181891.p2 GENE.R_Transcript_181891~~R_Transcript_181891.p2 ORF type:complete len:245 (+),score=37.14,RVT_1|PF00078.23|3.3e-38 R_Transcript_181891:2694-3428(+)
MYCTVLSKLLTEKLKLVVEGLVGQEQAAFIARRSIHNNILSSHNLVHSYGRKHILPRAMVKIDIKKAYDSVSWKFIKAMLSYYEFPGIFLDRVMTCLSTTQFSVNINGELKGFFKGEGGLRQGDPMSPYLFVLCMEILSRMLRNGFRNPDLKPHPKCSRMKLNHLIFADELLLFTKGEKKSIISMLAIINDFSGISGLCANETKSFIYFGGLSQEEKGDMLACTGYSEGSLPFRYLGVPCQPLI*

Click here to download the sequence:
Link to NCBI Protein BLAST