Transcript Information: R_Transcript_181891.p6


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.904656795275
Replicate 21.4606122028729
Replicate 30.79675609030095
Condition 2: 8 Hour
Replicate 10.85168225903462
Replicate 20.97221225396459
Replicate 31.2627207388095
Condition 3: 24 Hour
Replicate 10.79853242531145
Replicate 20.38356971983613
Replicate 30.76131146737034


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_181891.p6 GENE.R_Transcript_181891~~R_Transcript_181891.p6 ORF type:complete len:115 (+),score=24.07,zf-RVT|PF13966.2|8.1e-16 R_Transcript_181891:3911-4255(+)
ATGGGCAGTATTGAAGCAAGCAAGAAGGCTTTGTTGGATTGGGGGCAGAAGGGGAGATTCAACATTGGGAGTGCATATAATTTTTTGAGGAGGGAAGGCAGGAAACATCAATGGTGCACTCTTAACTGGTCCTCTTGTGCCAGACCTAGAGCTCAAGTGATAGCATGGATGGCTTTCCATGGGAGGTTGAAGACCAGGAGCTTTCTGAAGGGTAGAAAGATTATTGATGAAGATCAATGTGGCATGCGCCAGCAAGGAAGTGAAAATTGCTCACACCTGTTCTTTCTATATCAGGAAACAAAAGTGATTTGGCAGGAAATGTGTGAATGGTCTCGGATTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_181891.p6 GENE.R_Transcript_181891~~R_Transcript_181891.p6 ORF type:complete len:115 (+),score=24.07,zf-RVT|PF13966.2|8.1e-16 R_Transcript_181891:3911-4255(+)
MGSIEASKKALLDWGQKGRFNIGSAYNFLRREGRKHQWCTLNWSSCARPRAQVIAWMAFHGRLKTRSFLKGRKIIDEDQCGMRQQGSENCSHLFFLYQETKVIWQEMCEWSRIG*

Click here to download the sequence:
Link to NCBI Protein BLAST