Transcript Information: R_Transcript_18190.p1


Annotated TAIR IDAT2G41760.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function WDYHV (InterPro:IPR019161); Has 201 Blast hits to 201 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17422864-17424255 | Forward length=221
E-Value8.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2757445828567
Replicate 20.56441667785747
Replicate 30.6157725160256
Condition 2: 8 Hour
Replicate 10.78986661120146
Replicate 20.84153856391559
Replicate 30.97589304410683
Condition 3: 24 Hour
Replicate 10.37028721335007
Replicate 20.8300366249142
Replicate 30.58837915824993


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18190.p1 GENE.R_Transcript_18190~~R_Transcript_18190.p1 ORF type:internal len:186 (+),score=21.14,Nt_Gln_amidase|PF09764.5|3.3e+03,Nt_Gln_amidase|PF09764.5|3.1e+03,Nt_Gln_amidase|PF09764.5|1.1e-38 R_Transcript_18190:2-556(+)
AAAAACAGGACAAAAGGAAAAAGAGAAAAAAAACAACTTTACCAAAATCCAACAAACAAAACGGCGCGTGTACAAGTAGAATTTTGGGGGATTTTGATTTTGCAGCATTCAAAAACCAAACAACAAAAGCTCACTTACAAACACAGTGAACCACCCTTCTCAAATTACTCATTCATGGAGGAACAACAACAGCAGCAACGGCAGCCACCACCGCCTGAGATACCCCAGTTCGATCGCACCCCTTATTACTGTGAGGAGAACGTGTACAGGCTTTGCAAGAAACTCTGTGCAGCTGAAGACATAGAAGCTTCCGATCTTTATGTCGTTTTCATTTGTAATGATAAGAAACAGATTCCTCTTTGGCATCAGAAAGCCAGCCATAGGGCTGACGGGGTTATTCTCTGGGACTACCATGTAATCTGTGTACAGAGAAAAAGAAATGACAAGTCTGTACAAGTCTGGGATCTGGATTCTACTCTTTCATTTCCCTGTCCTCTAACATCGTATTATGAAGAAACGTTTCGTCCGTCATTTAAGCTCTTTTCCGAGTTCCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18190.p1 GENE.R_Transcript_18190~~R_Transcript_18190.p1 ORF type:internal len:186 (+),score=21.14,Nt_Gln_amidase|PF09764.5|3.3e+03,Nt_Gln_amidase|PF09764.5|3.1e+03,Nt_Gln_amidase|PF09764.5|1.1e-38 R_Transcript_18190:2-556(+)
KNRTKGKREKKQLYQNPTNKTARVQVEFWGILILQHSKTKQQKLTYKHSEPPFSNYSFMEEQQQQQRQPPPPEIPQFDRTPYYCEENVYRLCKKLCAAEDIEASDLYVVFICNDKKQIPLWHQKASHRADGVILWDYHVICVQRKRNDKSVQVWDLDSTLSFPCPLTSYYEETFRPSFKLFSEFQ

Click here to download the sequence:
Link to NCBI Protein BLAST