Transcript Information: R_Transcript_182046.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value9E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5872139960625
Replicate 21.7649064118048
Replicate 31.0623414537346
Condition 2: 8 Hour
Replicate 10.56778817268974
Replicate 20.51851320211445
Replicate 30.94704055410715
Condition 3: 24 Hour
Replicate 10.26617747510382
Replicate 20.38356971983613
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182046.p1 GENE.R_Transcript_182046~~R_Transcript_182046.p1 ORF type:5prime_partial len:345 (+),score=33.04,zf-RING_2|PF13639.2|3.7e+03,zf-RING_2|PF13639.2|2.9e+03,zf-RING_2|PF13639.2|1.8e-10,zf-rbx1|PF12678.3|1.3e+04,zf-rbx1|PF12678.3|1.1e-07,zf-ANAPC11|PF12861.3|2.4e-05 R_Transcript_182046:3-1037(+)
AAAACTACAGCAAGTAGAGAGTTACATGCCAAGGCCAAAGTTATGCAATCCAAAATCTTCATAATCTTCATATTCTATCTTCTATCATCGCACAAAATCATATGTCAAGGCCAAACATGCATTCGAGATTCATTTCAAGTTCATTGCAAAAATGGCATAGCAATCTTAACATTCCGTGACCCCTCCAACTCTCGTACGTTTGTTGTCCAAAGGATTGATTATCTTGCTCAAGAGATAACGTTCCTTGGTCCATCTACGTGCTTTGCTCAAAACCTCGAGTCCCTTGATCAAAATTACAAGCTGTACAAATGCAGGGGCGACAGGAATTTCGTCAATCAGGACTTTCATATGGTCCAGTGCCTTAGCACTTCAAATTACACAGTTGTGGCCACTCCTTTGAATGATTCTATCCTGTCCTGTGACGAATTTGGGGAGATGTTTGTTCCTGCTAATTATCAACAAGGCAAACGCTTGACCTTCATGCTTACTTGGTCCGATGGATGTGCACCTCAAGTAGGTTGTCCAGTTGCCGGTGGACCCTCATCACCTATATATTCCAAGAAGGTATTCATACCTATGGCCCTAGCTATTGCAGTTGGGCCACTAGCATTTGCTTGTCTAGCATGTTGCATCGCCAAAATTGTGATAAGACGGCGGAATTCATCTCGAGCCGCCACTCGTGTCATCGCAACCACAACAACATACGGCCAACACCACCCGGAGACAGGTTCAACACTTGCAGGTCTTGATCAGTCAAGCATGGACTCTTATCCTATTGTGGTCATTGGTGAAGATAACGGACATTTGTTAAAGAATGGCCAAGATAGTATTTGTCCAATTTGCTTGTGTGATTATTGCCCAAATGAGAGCTTGAAAATCTTGCCTGTATGTCTTCATCGATTTCATGCTGATTGTATTGACAAATGGCTTCGTGCTAAAGCCTTTTGCCCCATTTGTCGAGCTGCTCCCCCTACGATACTTCTCCTAGAGTTTAACATCACCCCTTCAAATGACCTCAAGGTAGCACCCCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182046.p1 GENE.R_Transcript_182046~~R_Transcript_182046.p1 ORF type:5prime_partial len:345 (+),score=33.04,zf-RING_2|PF13639.2|3.7e+03,zf-RING_2|PF13639.2|2.9e+03,zf-RING_2|PF13639.2|1.8e-10,zf-rbx1|PF12678.3|1.3e+04,zf-rbx1|PF12678.3|1.1e-07,zf-ANAPC11|PF12861.3|2.4e-05 R_Transcript_182046:3-1037(+)
KTTASRELHAKAKVMQSKIFIIFIFYLLSSHKIICQGQTCIRDSFQVHCKNGIAILTFRDPSNSRTFVVQRIDYLAQEITFLGPSTCFAQNLESLDQNYKLYKCRGDRNFVNQDFHMVQCLSTSNYTVVATPLNDSILSCDEFGEMFVPANYQQGKRLTFMLTWSDGCAPQVGCPVAGGPSSPIYSKKVFIPMALAIAVGPLAFACLACCIAKIVIRRRNSSRAATRVIATTTTYGQHHPETGSTLAGLDQSSMDSYPIVVIGEDNGHLLKNGQDSICPICLCDYCPNESLKILPVCLHRFHADCIDKWLRAKAFCPICRAAPPTILLLEFNITPSNDLKVAPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST