Transcript Information: R_Transcript_182050.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value6E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0702669318663
Replicate 27.2579803908191
Replicate 35.7973842064336
Condition 2: 8 Hour
Replicate 11.81376777387
Replicate 21.3803013482213
Replicate 31.3445637496583
Condition 3: 24 Hour
Replicate 10.85028915658163
Replicate 21.089148587189
Replicate 30.67554644095362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182050.p1 GENE.R_Transcript_182050~~R_Transcript_182050.p1 ORF type:complete len:162 (-),score=17.18,zf-RING_2|PF13639.2|7.2e+03,zf-RING_2|PF13639.2|3.4e-11,zf-rbx1|PF12678.3|1e+04,zf-rbx1|PF12678.3|1.4e-07,zf-ANAPC11|PF12861.3|2.3e-06,zf-RING_11|PF17123.1|4.1e-06,zf-RING_11|PF17123.1|3.4e+03 R_Transcript_182050:110-595(-)
ATGTTTGAATATATTTATGCAGGACCCTCATCACCTATATATTCCAAGAAGGTATTCATACCTATGGCCCTAGCTATTGCAGTTGGGCCACTAGCATTTGCTTGTCTAGCATGTTGCATCGCCAAAATTGTGATAAGACGGCGGAATTCATCTCGAGCCGCCACTCGTGTCATCGCAACCACAACAACATACGGCCAACACCACCCGGAGACAGGTTCAACACTTGCAGGTCTTGATCAGTCAAGCATGGACTCTTATCCTATTGTGGTCATTGGTGAAGATAACGGACATTTGTTAAAGAATGGCCAAGATAGTATTTGTCCAATTTGCTTGTGTGATTATTGCCCAAATGAGAGCTTGAAAATCTTGCCTGTATGTCTTCATCGATTTCATGCTGATTGTATTGACCAATGGCTTCGTGCTAAAGCCCTTTGCCCCATTTGCCGAGCTGCTCCCCCTACGATGCATACTTCTCCTGGAGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182050.p1 GENE.R_Transcript_182050~~R_Transcript_182050.p1 ORF type:complete len:162 (-),score=17.18,zf-RING_2|PF13639.2|7.2e+03,zf-RING_2|PF13639.2|3.4e-11,zf-rbx1|PF12678.3|1e+04,zf-rbx1|PF12678.3|1.4e-07,zf-ANAPC11|PF12861.3|2.3e-06,zf-RING_11|PF17123.1|4.1e-06,zf-RING_11|PF17123.1|3.4e+03 R_Transcript_182050:110-595(-)
MFEYIYAGPSSPIYSKKVFIPMALAIAVGPLAFACLACCIAKIVIRRRNSSRAATRVIATTTTYGQHHPETGSTLAGLDQSSMDSYPIVVIGEDNGHLLKNGQDSICPICLCDYCPNESLKILPVCLHRFHADCIDQWLRAKALCPICRAAPPTMHTSPGV*

Click here to download the sequence:
Link to NCBI Protein BLAST