Transcript Information: R_Transcript_18207.p1


Annotated TAIR IDAT5G48560.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19684160-19686871 | Forward length=498
E-Value1.6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.701471789005
Replicate 29.0306668457196
Replicate 39.4828967467943
Condition 2: 8 Hour
Replicate 110.92648812162
Replicate 217.191430662847
Replicate 314.34562774837
Condition 3: 24 Hour
Replicate 112.713194325019
Replicate 213.162009337925
Replicate 316.003913104398


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18207.p1 GENE.R_Transcript_18207~~R_Transcript_18207.p1 ORF type:5prime_partial len:186 (+),score=45.57,HLH|PF00010.22|6.4e-07 R_Transcript_18207:1-558(+)
CACAGTCTTGCAGAACGGGTGAGAAGAGAGAAGATCAGTGAGAGGATGAGACTACTTCAAGAACTTGTTCCTGGGTGCAATAAGATTACTGGAAAAGCTGTAATGCTAGATGAGATAATCAACTATGTCCAGTCACTCCAGCAGCAGGTTGAGTTTTTGTCAATGAAACTTGCAACAGTAAATCCAAGATTGGACCTCAACATTGAACGACTTCTTGCGAAAGATCAAATGTTTTCAGCAAGAGGAGGTCCTTCATCCGGACTAGGATTTTCTCCAGAGATGCCGATGGCTTATCCTTCTCTCCACCCAACACAAGCCCCCATGTTGCAGCCAGTTGTTCCTGGCATTGGAAACTCTTCTGAAGCACTAAGGAGAACTATTACTTCACAATTGATGAACATGGGAGGAGGGTACAAAGAACCTGCTTCTCAGCTACCTAATGCATGGGAGGACGAGCTTCACAATGTTGTGCAGATGGGCTTCAATGCAAGTGCTCCCCTCGAGAATCAAGAAACTAACTGTTCAATATCATCAGGTCAAATGAAAGCCGAGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18207.p1 GENE.R_Transcript_18207~~R_Transcript_18207.p1 ORF type:5prime_partial len:186 (+),score=45.57,HLH|PF00010.22|6.4e-07 R_Transcript_18207:1-558(+)
HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPRLDLNIERLLAKDQMFSARGGPSSGLGFSPEMPMAYPSLHPTQAPMLQPVVPGIGNSSEALRRTITSQLMNMGGGYKEPASQLPNAWEDELHNVVQMGFNASAPLENQETNCSISSGQMKAES*

Click here to download the sequence:
Link to NCBI Protein BLAST