Transcript Information: R_Transcript_18221.p1


Annotated TAIR IDAT3G62240.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:23033592-23036653 | Reverse length=812
E-Value4E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5431482441903
Replicate 23.9217994424343
Replicate 34.6570241618607
Condition 2: 8 Hour
Replicate 16.0047928015481
Replicate 26.4212951665921
Replicate 36.9192924855351
Condition 3: 24 Hour
Replicate 16.0384575554444
Replicate 24.8762580012204
Replicate 35.7291831836097


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18221.p1 GENE.R_Transcript_18221~~R_Transcript_18221.p1 ORF type:complete len:787 (+),score=146.25 R_Transcript_18221:232-2592(+)
ATGGACGACGGAAGCTGTGTGGTATGTGCGGAGACGCTAGAATGGGTGGCGTACGGCCCGTGCGGCCACCGAGACGTCTGTGCGACGTGCATCGCTCGTCTCAGATTTGTTTGCGACGATCGCCGTTGTTGTATCTGCAAGTCTCTCTCCAACTTCGTCTTTGTCACCAAGGCATTAGGGTCTTTCACGAGGGTAATAAATGACTTTTCAATTCTTCCAGCTGATGCAAAAGATGGTAAAGTGGGGCCATACTGGTTTCATGAGAGCATACAAGCATACTTTGATGATTGTGATGAATACAAGATCATCAAAGCTATGTGTAGGCTTTCCTGCAGTTTTTGTGACAAGTTGGAAGCAGAAGGGAGAAAGAATTCCAACAGAAGAAACAAGTTCAAGAGCGTTGAGCAGCTGAAAGATCATTTGTCTCGTAAACATGAACTTTTCTTCTGTAGCCTATGCCTAGAAAATAAGAAGGTTTTCATATGTGAGCAGAAGCTATATACCCAGGGTCAGTTAAGACAGCATATAAAAGATGGTGACTCAGAAGTTGATGGCAACGAAACTGAAAGATGCGGGTTTTCTGGACACCCACTTTGTGAGTTCTGCCAGATACCATTTTATGGTGATAATGAACTATACTTCCACATGTCTACTGAACATTATACTTGCCACATATGTCAGAGGCATGGGACTCAATATGAATACTACAAGGACTATAATGAGTTGGAGAACCACTTTCGGCTGGCTCATTTTCTTTGTGAGGATGGCTCATGCCTGGACAAGAAGTTTATTGTTTTCGCCACTGAAGCTGACATGAAGCGGCATATGGCCTTGGAACATGGTGAGCACTTGTCTCGTTCAAAACGCAACACTGCACTACAGCTACCTACATGCTTTCGTCATCGGGAGAGAGAGGAGGAGGCTCGCCGTATAAGAGCACGTGCTACTGGTCGAGGTGTAAGAGTTCATGTTACTGGTCGAGGTCTATCTGACCATCAACTCTCTTCTACTACTCCAGCTAGTGCTGAAAGAAATGGCTTTCATCTACCACATGGTGCTTCATCAATTCTGCAAGCAGTTCCTGATCGCAATGGGACTAGAGAAGCCAGTGCAACCTCAGATCCTGTGTCTTCTTCCGGGCAAACTCAGGATAATACGTTGGACTTCAGGAGTGTACTGCTGAGTAGTTCTGCCTTTCCTTCACTGCCCAGAACATCAAAAAGAAGACGTCGTAAATCCAAAAAGACCTCTGGGGAAACAAGTGCCGATAACGAAATTGCTCCCTGCTTAACTCCCGTAACTTCACCTATTGCTTCTTTAGCTGTGAATCACCCTCCATCGTTAGCTAGTAGTTCTTCACATTCGAGGGGCCCAATAAATGCAGGACTTGTATCTCAGTCTACTTCTGTTAACCCTGTGCCACCCTCATCAAGCAATGATATCCTTTCCGCTAGTTGTGCAAATTCATTGAGCAATTCTGGTAACAAGGATGTGGGCTCATCTTCATCGGCGCCAAATCTTTTTGACAGGCACTCCATTTGCTCTTCTGTGCATGATGGCCTCCCACTGAAAAAGGATGATGATGAGACTGCTAACAAATCTTTGATTGAAGGTATACATGCTGCGCTTGAATTTGATAAGGACAAATTTGCTGCCTTCAAAATAATCTCAAAAGAATATCGCGATGGCGAGATTGATGCTGGGGAATTCCTTGCGTATGTACATCAGTTTGGCCTTGCACACCTTATTCTTGATTTGGCTAGACTCTGTCCTGATCCACAGAAGCGAAAGGAATTGATGGAAATTCACAAGATGAGCTTGGGAGATGTGAAAGAAAATGGGCGGAGGATAGAGAATAGTAAGAGAAGTGCTAACAAGGCTTTTAATAAAGGGAAGGGAAAATGTGAAGATTCTGGAAGTAGCAGTAAGGACTTGTCAGACAGTATAGGAGATCACTTGAAAGAGCTCAAGTTGAATACCCAGCCTCAAAAGGAGGAGCCTTCATCTTCAAGTGTTATGGATCGTCCAGCCCAAGGTAAATTGAGAACTCCGTCTAAAGAATCTAGGAATGAGGATGTGAGTTTCTTGAATGGAAGTTCCTCGAAGAATTCTCTGGAAACAACAGCAGAAGGAAGCAAAAACAAACCAAAGAAAAAGTCATCGAAGTTCCTTAAAAACCGTCAAGGTGAAAGTTCAGCATCGGTAGTTGTTCCACCCGTCAATTGTTCCGACTTGGCTTCTGATCCAATAGGGGGTCGACCTAATCAAGATGCAATTCTTGCTGCAGCTCGTGGGGTTTGGCGGAACGGTGGGGGTAGGAAACTGGTGGCTATGAGCCTGGCATCACCGTCAACTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18221.p1 GENE.R_Transcript_18221~~R_Transcript_18221.p1 ORF type:complete len:787 (+),score=146.25 R_Transcript_18221:232-2592(+)
MDDGSCVVCAETLEWVAYGPCGHRDVCATCIARLRFVCDDRRCCICKSLSNFVFVTKALGSFTRVINDFSILPADAKDGKVGPYWFHESIQAYFDDCDEYKIIKAMCRLSCSFCDKLEAEGRKNSNRRNKFKSVEQLKDHLSRKHELFFCSLCLENKKVFICEQKLYTQGQLRQHIKDGDSEVDGNETERCGFSGHPLCEFCQIPFYGDNELYFHMSTEHYTCHICQRHGTQYEYYKDYNELENHFRLAHFLCEDGSCLDKKFIVFATEADMKRHMALEHGEHLSRSKRNTALQLPTCFRHREREEEARRIRARATGRGVRVHVTGRGLSDHQLSSTTPASAERNGFHLPHGASSILQAVPDRNGTREASATSDPVSSSGQTQDNTLDFRSVLLSSSAFPSLPRTSKRRRRKSKKTSGETSADNEIAPCLTPVTSPIASLAVNHPPSLASSSSHSRGPINAGLVSQSTSVNPVPPSSSNDILSASCANSLSNSGNKDVGSSSSAPNLFDRHSICSSVHDGLPLKKDDDETANKSLIEGIHAALEFDKDKFAAFKIISKEYRDGEIDAGEFLAYVHQFGLAHLILDLARLCPDPQKRKELMEIHKMSLGDVKENGRRIENSKRSANKAFNKGKGKCEDSGSSSKDLSDSIGDHLKELKLNTQPQKEEPSSSSVMDRPAQGKLRTPSKESRNEDVSFLNGSSSKNSLETTAEGSKNKPKKKSSKFLKNRQGESSASVVVPPVNCSDLASDPIGGRPNQDAILAAARGVWRNGGGRKLVAMSLASPSTG*

Click here to download the sequence:
Link to NCBI Protein BLAST